RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	HEXA-AS1	Q9H8Q6	139 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	MCUB	Q9NWR8	336 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	GFOD1	Q9NXC2	390 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	SLC2A8	Q9NY64	477 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	COPZ2	Q9P299	210 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	KIAA2026	Q5HYC2	2103 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
APTX-231	ENST00000494973	IGKV1D-8	A0A087WSZ0	117 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	NBPF19	A0A087WUL8	3843 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	LYRM1	O43325	122 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	LANCL1	O43813	399 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	SLC22A5	O76082	557 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	PMP2	P02689	132 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	PRTN3	P24158	256 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	CD34	P28906	385 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	LPCAT3	Q6P1A2	487 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.13	□□□□□ -0.63
APTX-231	ENST00000494973	ZFAND2B	Q8WV99	257 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	GIMAP1	Q8WWP7	306 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	CREB3L1	Q96BA8	519 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	TMEM133	Q9H2Q1	129 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	HRASLS	Q9HDD0	168 aa		11.13	□□□□□ -0.63
APTX-231	ENST00000494973	PDZD2	O15018	2839 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	FAM172BP	A6NC97	362 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	TOX4	O94842	621 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	IGHV4-31	P0DP07	118 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	NFYB	P25208	207 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	IL3RA	P26951	378 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	S100G	P29377	79 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	RFX2	P48378	723 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	PRRX1	P54821	245 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	PAX8	Q06710	450 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	HERPUD1	Q15011	391 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	SURF2	Q15527	256 aa	Predicted RBP	11.12	□□□□□ -0.63
APTX-231	ENST00000494973	IGSF11	Q5DX21	431 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	PRAMEF5	Q5TYX0	476 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	DHRS11	Q6UWP2	260 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	SPNS3	Q6ZMD2	512 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.12	□□□□□ -0.63
APTX-231	ENST00000494973	OR2AK2	Q8NG84	335 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	OR9G1	Q8NH87	305 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	RFESD	Q8TAC1	157 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF596	Q8TC21	504 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	CYYR1	Q96J86	154 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.12	□□□□□ -0.63
APTX-231	ENST00000494973	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.12	□□□□□ -0.63
APTX-231	ENST00000494973	LPAR2	Q9HBW0	351 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	HIF1AN	Q9NWT6	349 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	OR2W1	Q9Y3N9	320 aa		11.12	□□□□□ -0.63
APTX-231	ENST00000494973	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.12	□□□□□ -0.63
APTX-231	ENST00000494973	IGKV1-6	A0A0C4DH72	117 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973		M0QYG6	137 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	TOR1A	O14656	332 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	TUSC2	O75896	110 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	PTTG1	O95997	202 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	TGFA	P01135	160 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	PPY	P01298	95 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	FCGR2C	P31995	323 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	CEACAM6	P40199	344 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	LOXL3	P58215	753 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	ARF6	P62330	175 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	RBMS2	Q15434	407 aa	Known RBP	11.11	□□□□□ -0.63
APTX-231	ENST00000494973	MSMO1	Q15800	293 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	MORN2	Q502X0	79 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	PLA1A	Q53H76	456 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	ENKUR	Q8TC29	256 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	MOB3A	Q96BX8	217 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	MSI2	Q96DH6	328 aa	Known RBP	11.11	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.11	□□□□□ -0.63
APTX-231	ENST00000494973	CLEC7A	Q9BXN2	247 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	SIRPD	Q9H106	197 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	MMP26	Q9NRE1	261 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	RDH8	Q9NYR8	311 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	RBM7	Q9Y580	266 aa	Known RBP	11.11	□□□□□ -0.63
APTX-231	ENST00000494973	AUP1	Q9Y679	476 aa		11.11	□□□□□ -0.63
APTX-231	ENST00000494973	CR1	P17927	2039 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	FOSL1	P15407	271 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	OMG	P23515	440 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	LUM	P51884	338 aa	Predicted RBP	11.1	□□□□□ -0.63
APTX-231	ENST00000494973	LTC4S	Q16873	150 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	RGS21	Q2M5E4	152 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	SCGB2B2	Q4G0G5	96 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	LINC00311	Q8N616	119 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	POC5	Q8NA72	575 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	BEND2	Q8NDZ0	799 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	OR52L2P	Q8NGH6	319 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	TERB2	Q8NHR7	220 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	C18orf12	Q96KH6	178 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	ABHD14A	Q9BUJ0	271 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	SUCNR1	Q9BXA5	334 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	DPAGT1	Q9H3H5	408 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	C7orf69	Q9H7B7	122 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	OR1A1	Q9P1Q5	309 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	KCNS2	Q9ULS6	477 aa		11.1	□□□□□ -0.63
APTX-231	ENST00000494973	ABCA2	Q9BZC7	2435 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	YLPM1	P49750	1951 aa	Known RBP	11.09	□□□□□ -0.63
APTX-231	ENST00000494973	IGHV2-26	A0A0B4J1V2	119 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	LINC00854	A0A1B0GVQ3	168 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	FAM240B	A0A1B0GVZ2	78 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	MEX3A	A1L020	520 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms