RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 OR10V1Q8NGI7 309 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 OR1L1Q8NH94 360 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 CHCHD6Q9BRQ6 235 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 CLEC2DQ9UHP7 191 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 PEX16Q9Y5Y5 336 aa18.17■□□□□ 0.5
COL27A1-208ENST00000494780 FAM90A10PA6NDY2 464 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 FAM90A7PA6NKC0 464 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 FAM90A23PA8MXZ1 464 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 GLAP06280 429 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 PSMB8P28062 276 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 CDH26Q8IXH8 852 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 PRR18Q8N4B5 295 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 TMEM80Q96HE8 168 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 PGLYRP3Q96LB9 341 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 KCTD7Q96MP8 289 aa18.16■□□□□ 0.5
COL27A1-208ENST00000494780 CHCHD3Q9NX63 227 aaKnown RBP18.16■□□□□ 0.5
COL27A1-208ENST00000494780 ZNF107Q9UII5 783 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-208ENST00000494780 TRBV5-7A0A0A0MS05 114 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 SEC14L6B5MCN3 397 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 SC5DO75845 299 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 RCC1P18754 421 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-208ENST00000494780 LSAMPQ13449 338 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 FHL3Q13643 280 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 PRR25Q96S07 402 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 U3KQK5 164 aa18.15■□□□□ 0.5
COL27A1-208ENST00000494780 ECI1P42126 302 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 MORN2Q502X0 79 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 AWAT2Q6E213 333 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 ZNF554Q86TJ5 538 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 ZFP41Q8N8Y5 198 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 ZNF485Q8NCK3 441 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 MYOZ3Q8TDC0 251 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 OR14A2Q96R54 314 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 SELENOIQ9C0D9 397 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 BANF2Q9H503 90 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 TAF9BQ9HBM6 251 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 OR2S2Q9NQN1 319 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 SCOCQ9UIL1 159 aa18.14■□□□□ 0.49
COL27A1-208ENST00000494780 MGMTP16455 207 aa18.13■□□□□ 0.49
COL27A1-208ENST00000494780 FUT3P21217 361 aa18.13■□□□□ 0.49
COL27A1-208ENST00000494780 TAS2R43P59537 309 aa18.13■□□□□ 0.49
COL27A1-208ENST00000494780 MMDQ15546 238 aa18.13■□□□□ 0.49
COL27A1-208ENST00000494780 OR11H1Q8NG94 326 aa18.13■□□□□ 0.49
COL27A1-208ENST00000494780 RBMXL1Q96E39 390 aaKnown RBP18.13■□□□□ 0.49
COL27A1-208ENST00000494780 MBNL3Q9NUK0 354 aaKnown RBP18.13■□□□□ 0.49
COL27A1-208ENST00000494780 KCNIP1Q9NZI2 227 aa18.13■□□□□ 0.49
COL27A1-208ENST00000494780 A0A1W2PPK0 400 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 MAS1P04201 325 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 SLC2A2P11168 524 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-208ENST00000494780 PPIFP30405 207 aaKnown RBP18.12■□□□□ 0.49
COL27A1-208ENST00000494780 ADARB1P78563 741 aaKnown RBP18.12■□□□□ 0.49
COL27A1-208ENST00000494780 LYPD6Q86Y78 171 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 UBE2E2Q96LR5 201 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 Q96M66 194 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 ABHD14AQ9BUJ0 271 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 JPT1Q9UK76 154 aa18.12■□□□□ 0.49
COL27A1-208ENST00000494780 UBE2QL1A1L167 161 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 CRTAPO75718 401 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-208ENST00000494780 BAG2O95816 211 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 MYF6P23409 242 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 CAPGP40121 348 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 ZNF260Q3ZCT1 412 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 NKAPLQ5M9Q1 402 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 TTC23Q5W5X9 447 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 SIGIRRQ6IA17 410 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 TMEM65Q6PI78 240 aa18.11■□□□□ 0.49
COL27A1-208ENST00000494780 HLA-DRB1P01911 266 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 OR8U8P0C7N1 319 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 INSL3P51460 131 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 ACTBP60709 375 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 HTD2P86397 168 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 RUNX1Q01196 453 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 DOC2BQ14184 412 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 GNMTQ14749 295 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 ODF3L1Q8IXM7 274 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 NKAIN3Q8N8D7 197 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 ZNF491Q8N8L2 437 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 SETD9Q8NE22 299 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 OR52L2PQ8NGH6 319 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 CYGBQ8WWM9 190 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 GGHQ92820 318 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 DERL3Q96Q80 235 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 ZNF251Q9BRH9 671 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 OR51J1Q9H342 316 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 VSIG4Q9Y279 399 aa18.1■□□□□ 0.49
COL27A1-208ENST00000494780 ZNF256Q9Y2P7 627 aaPredicted RBP18.1■□□□□ 0.49
COL27A1-208ENST00000494780 PDCD6O75340 191 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 ST3GAL4Q11206 333 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 KIAA0141Q14154 515 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-208ENST00000494780 LY6G6FQ5SQ64 297 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 OR1N2Q8NGR9 330 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 MRPL30Q8TCC3 161 aaKnown RBP18.09■□□□□ 0.49
COL27A1-208ENST00000494780 THRSPQ92748 146 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 NABP2Q9BQ15 211 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 UQCC2Q9BRT2 126 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 MRPL20Q9BYC9 149 aaKnown RBP18.09■□□□□ 0.49
COL27A1-208ENST00000494780 KLK15Q9H2R5 256 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 GHRLQ9UBU3 117 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 WSB1Q9Y6I7 421 aa18.09■□□□□ 0.49
COL27A1-208ENST00000494780 PNMA8CA0A1B0GUJ8 204 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms