RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 BVES-AS1Q5T3Y7 98 aa4.1□□□□□ -1.75
PRKD3-210ENST00000494667 CLUHP3Q96NS8 147 aa4.1□□□□□ -1.75
PRKD3-210ENST00000494667 FOXQ1Q9C009 403 aa4.1□□□□□ -1.75
PRKD3-210ENST00000494667 MRPL18Q9H0U6 180 aaKnown RBP4.1□□□□□ -1.75
PRKD3-210ENST00000494667 COA3Q9Y2R0 106 aaPredicted RBP4.1□□□□□ -1.75
PRKD3-210ENST00000494667 PCNX3Q9H6A9 2034 aa4.1□□□□□ -1.75
PRKD3-210ENST00000494667 A0A1W2PS18 150 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 GAGE12BA1L429 117 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 LRP5LA4QPB2 252 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 CISD3P0C7P0 127 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 C3orf79P0CE67 100 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 NPY1RP25929 384 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 TIMP3P35625 211 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 ZNF154Q13106 437 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 RTP5Q14D33 572 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 KISS1Q15726 138 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 C12orf54Q6X4T0 127 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 DGAT2L6Q6ZPD8 337 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 RNF144BQ7Z419 303 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 HAPLN4Q86UW8 402 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 SAXO1Q8IYX7 474 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 RPP25LQ8N5L8 163 aaKnown RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 ST6GALNAC3Q8NDV1 305 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 OR10G3Q8NGC4 313 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 SCGB1C1Q8TD33 95 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 ZNF48Q96MX3 618 aaPredicted RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 VSIRQ9H7M9 311 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 ZDHHC11Q9H8X9 412 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM74BQ9NUR3 256 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 PEF1Q9UBV8 284 aaKnown RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 SLC17A4Q9Y2C5 497 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 A0A1B0GUS0 222 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 PHF1O43189 567 aaPredicted RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 GALR2O43603 387 aaPredicted RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 GLB1P16278 677 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 TUBG1P23258 451 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 HBG1P69891 147 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 HBG2P69892 147 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 CST9LP1Q5W188 147 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 FOXL2NBQ6ZUU3 175 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 WDR5BQ86VZ2 330 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 LRP11Q86VZ4 500 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 FER1L6-AS1Q8NA97 138 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 NECAP1Q8NC96 275 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 OR5A2Q8NGI9 324 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 OR4C3Q8NH37 302 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 FAM3CQ92520 227 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 DPF1Q92782 380 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 TAF15Q92804 592 aaKnown RBP eCLIP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 ZNF524Q96C55 264 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 MEGF9Q9H1U4 602 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 CHST1O43916 411 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 SELENOVP59797 346 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 GRB2P62993 217 aaKnown RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 HIST3H3Q16695 136 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 SP6Q3SY56 376 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 CXorf66Q5JRM2 361 aaPredicted RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 PSRC1Q6PGN9 363 aaPredicted RBP4.09□□□□□ -1.75
PRKD3-210ENST00000494667 SLC25A47Q6Q0C1 308 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM14EPQ6UXP3 125 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 LCNL1Q6ZST4 164 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 OR8B12Q8NGG6 310 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 OR10G9Q8NGN4 311 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 OR1K1Q8NGR3 316 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 IRF7Q92985 503 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 LHX4Q969G2 390 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 ELSPBP1Q96BH3 223 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 FAM60AQ9NP50 221 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM38BQ9NVV0 291 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 PPIAL4AQ9Y536 164 aa4.09□□□□□ -1.75
PRKD3-210ENST00000494667 A0A1W2PP11 408 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 FCN1O00602 326 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 ADAM20O43506 726 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 CA2P00918 260 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 IGKV1D-33P01593 117 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 IGKV1-33P01594 117 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 SEC11AP67812 179 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 PDGFRLQ15198 375 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 STUMQ69YW2 141 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 MTURNQ8N3F0 131 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 GUCD1Q96NT3 240 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 GNB4Q9HAV0 340 aa4.09□□□□□ -1.76
PRKD3-210ENST00000494667 PHF3Q92576 2039 aaKnown RBP4.08□□□□□ -1.76
PRKD3-210ENST00000494667 TRBV6-6A0A0A6YYG2 114 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 NPIPB11E5RHQ5 1161 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 H3BSH0 61 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 HCRTR1O43613 425 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 PPYP01298 95 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 CYBAP13498 195 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 AREGP15514 252 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 ZNF83P51522 516 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 COL9A2Q14055 689 aaPredicted RBP4.08□□□□□ -1.76
PRKD3-210ENST00000494667 SAMD13Q5VXD3 122 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 PLPP4Q5VZY2 271 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 LCN15Q6UWW0 184 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 OR10P1Q8NGE3 313 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 FAM131CQ96AQ9 280 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 BMFQ96LC9 184 aa4.08□□□□□ -1.76
PRKD3-210ENST00000494667 COMMD5Q9GZQ3 224 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms