RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 Q96M66 194 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 FAAP24Q9BTP7 215 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 TAF9BQ9HBM6 251 aa7.58□□□□□ -1.2
MSH5-218ENST00000494646 SRMP19623 302 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 CD1BP29016 333 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 F2RL1P55085 397 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 SLC35B1P78383 322 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 GPR50Q13585 617 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 GNMTQ14749 295 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 MORN2Q502X0 79 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 RBM48Q5RL73 367 aaKnown RBP7.57□□□□□ -1.2
MSH5-218ENST00000494646 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 SLC25A48Q6ZT89 311 aaKnown RBP7.57□□□□□ -1.2
MSH5-218ENST00000494646 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 TGIF2LXQ8IUE1 241 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 MS4A15Q8N5U1 240 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 C8orf31Q8N9H6 132 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 Q8N9W7 124 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 ZNF439Q8NDP4 499 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 NRG4Q8WWG1 115 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 TMEM203Q969S6 136 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 RASL11BQ9BPW5 248 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 UQCC2Q9BRT2 126 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 MND1Q9BWT6 205 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 VCXQ9H320 206 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 KCNK15Q9H427 330 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 DCLRE1BQ9H816 532 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 OR2S2Q9NQN1 319 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 PLSCR3Q9NRY6 295 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 SCN3BQ9NY72 215 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 KCNIP1Q9NZI2 227 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
MSH5-218ENST00000494646 FAM90A10PA6NDY2 464 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 FAM90A7PA6NKC0 464 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 NUDT19A8MXV4 375 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 FAM90A23PA8MXZ1 464 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 PDCD6O75340 191 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 SC5DO75845 299 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 MOSP00540 346 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 VSIG8P0DPA2 414 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 CPEP16870 476 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 MAPK3P27361 379 aaPredicted RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 HTR2CP28335 458 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 HOXD3P31249 432 aaPredicted RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 PPP1CCP36873 323 aaKnown RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 GPR12P47775 334 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 THBS3P49746 956 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 AQP4P55087 323 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 KRTAP10-11P60412 298 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 RPL23AP62750 156 aaKnown RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 SLC35A2P78381 396 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 SPHARQ15513 63 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 HSD17B12Q53GQ0 312 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 LIPKQ5VXJ0 399 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 RNLSQ5VYX0 342 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 GLT8D1Q68CQ7 371 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 C6orf201Q7Z4U5 140 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 LRRTM1Q86UE6 522 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 FOXRED2Q8IWF2 684 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 MRPL41Q8IXM3 137 aaKnown RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 GAPTQ8N292 157 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 STPG2Q8N412 459 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 Q8N6K4 173 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 NKAIN3Q8N8D7 197 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 SETD6Q8TBK2 473 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 MRPL30Q8TCC3 161 aaKnown RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 RITA1Q96K30 269 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 NEDD4LQ96PU5 975 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 S1PR3Q99500 378 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 SULT4A1Q9BR01 284 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 RAB9BQ9NP90 201 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 GHRLQ9UBU3 117 aa7.56□□□□□ -1.2
MSH5-218ENST00000494646 LSM2Q9Y333 95 aaKnown RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 HUWE1Q7Z6Z7 4374 aaKnown RBP7.56□□□□□ -1.2
MSH5-218ENST00000494646 WI2-2373I1.2A0A1W2PRP0 233 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 CA11O75493 328 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 GLAP06280 429 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 HSMCR30P0CW71 290 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 SLC2A2P11168 524 aaPredicted RBP7.55□□□□□ -1.2
MSH5-218ENST00000494646 PNLIPRP3Q17RR3 467 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 C1orf100Q5SVJ3 147 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 TRAT1Q6PIZ9 186 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 ETV3LQ6ZN32 361 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 OR2W3Q7Z3T1 314 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 IZUMO1Q8IYV9 350 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 KLHL30-AS1Q8NEE0 82 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 THRSPQ92748 146 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 CCDC90BQ9GZT6 254 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 CST11Q9H112 138 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 ZFP57Q9NU63 452 aa7.55□□□□□ -1.2
MSH5-218ENST00000494646 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
MSH5-218ENST00000494646 LIN7CQ9NUP9 197 aaKnown RBP7.55□□□□□ -1.2
MSH5-218ENST00000494646 TPRKBQ9Y3C4 175 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms