RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 Q6ZT83 130 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 C14orf79Q96F83 325 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 ESRP2Q9H6T0 727 aaKnown RBP9.47□□□□□ -0.89
CHMP3-209ENST00000494623 KCNJ16Q9NPI9 418 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 CACNG5Q9UF02 275 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 RNF150Q9ULK6 438 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 A0A1B0GU03 582 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 COLCA2A8K830 154 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 IQCF6A8MYZ5 107 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 UMAD1C9J7I0 102 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-209ENST00000494623 J3QW42 95 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 TFF1P04155 84 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 BAXQ07812 192 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 TMEM267Q0VDI3 215 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF146Q15072 292 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 C9orf106Q8NAJ2 232 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 C2CD4CQ8TF44 421 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 TREM2Q9NZC2 230 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 EP300Q09472 2414 aaPredicted RBP9.46□□□□□ -0.89
CHMP3-209ENST00000494623 C7orf77A4D0Y5 90 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 PSPNO60542 156 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 HAND1O96004 215 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 IGHG3P01860 377 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 FTH1P19P0C7X4 201 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 IAPPP10997 89 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 HOXC12P31275 282 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 KIR2DL2P43627 348 aaPredicted RBP9.46□□□□□ -0.89
CHMP3-209ENST00000494623 RPL23AP62750 156 aaKnown RBP9.46□□□□□ -0.89
CHMP3-209ENST00000494623 FOXF2Q12947 444 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 AWAT1Q58HT5 328 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 AVPI1Q5T686 147 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 MOB1BQ7L9L4 216 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 SLC35B3Q9H1N7 401 aa9.46□□□□□ -0.89
CHMP3-209ENST00000494623 A6NLC8 198 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 KIAA1324LA8MWY0 1029 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-209ENST00000494623 CBR1P16152 277 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 LMO1P25800 156 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 RAB13P51153 203 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 FABP6P51161 128 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 FAM53AQ6NSI3 398 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-209ENST00000494623 SLC25A24Q6NUK1 477 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 STX12Q86Y82 276 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 GNPNAT1Q96EK6 184 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-209ENST00000494623 UFSP2Q9NUQ7 469 aa9.46□□□□□ -0.9
CHMP3-209ENST00000494623 PRR14LQ5THK1 2151 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 ZFHX4Q86UP3 3567 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 NPIPB11E5RHQ5 1161 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 MLNRO43193 412 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 IGKV1-5P01602 117 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 OR3A1P47881 315 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 AKR1D1P51857 326 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 HAGHQ16775 308 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF585BQ52M93 769 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 SPSB3Q6PJ21 355 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 THNSL2Q86YJ6 484 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 WDR31Q8NA23 367 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 LFNGQ8NES3 379 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 OR1L1Q8NH94 360 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 SFT2D1Q8WV19 159 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 ATP5SQ99766 215 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 DCAF16Q9NXF7 216 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 KCNIP1Q9NZI2 227 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 WIPI2Q9Y4P8 454 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 CACNA1HO95180 2353 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 TXNL1O43396 289 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 CD82P27701 267 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 RPL35P42766 123 aaKnown RBP9.45□□□□□ -0.9
CHMP3-209ENST00000494623 CEBPGP53567 150 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 AESQ08117 197 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 AKR1C8PQ5T2L2 129 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 PRAMEF6Q5VXH4 476 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 SHEQ5VZ18 495 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 ALKBH2Q6NS38 261 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 PIP4P1Q86T03 277 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF295-AS1Q8N0V1 137 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 DRAM1Q8N682 238 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 ISOC2Q96AB3 205 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 MSL2Q9HCI7 577 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 PARD6AQ9NPB6 346 aa9.45□□□□□ -0.9
CHMP3-209ENST00000494623 MBNL3Q9NUK0 354 aaKnown RBP9.45□□□□□ -0.9
CHMP3-209ENST00000494623 DSPP15924 2871 aaKnown RBP9.44□□□□□ -0.9
CHMP3-209ENST00000494623 SYNGR2O43760 224 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 TIMM8AO60220 97 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-209ENST00000494623 SULT1A1P50225 295 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 DEFB109BQ30KR1 87 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 C11orf53Q8IXP5 236 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 OR8G5Q8NG78 346 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 OR52L2PQ8NGH6 319 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 RAB40CQ96S21 281 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 PSENENQ9NZ42 101 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 PUS1Q9Y606 427 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHMP3-209ENST00000494623 GTF3C1Q12789 2109 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-209ENST00000494623 TMEM210A6NLX4 147 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 NDUFA2O43678 99 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 IFNA5P01569 189 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms