RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TBPL2Q6SJ96 375 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 EPGNQ6UW88 154 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 CASP12Q6UXS9 341 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TPGS1Q6ZTW0 290 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 SPATA24Q86W54 205 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TMEM25Q86YD3 366 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 BBS7Q8IWZ6 715 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ORMDL3Q8N138 153 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TMEM86AQ8N2M4 240 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 C17orf78Q8N4C9 275 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TMEM161BQ8NDZ6 487 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ZNF420Q8TAQ5 688 aaPredicted RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 PHF10Q8WUB8 498 aaKnown RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.32□□□□□ -2.04
SMC4-224ENST00000494612 SNF8Q96H20 258 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 CATSPER2Q96P56 530 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 TSNAXQ99598 290 aaKnown RBP2.32□□□□□ -2.04
SMC4-224ENST00000494612 CIB1Q99828 191 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 LHX5Q9H2C1 402 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 OR52A5Q9H2C5 316 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 ASB7Q9H672 318 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 PLEKHF2Q9H8W4 249 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 RMND1Q9NWS8 449 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 MS4A12Q9NXJ0 267 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 VAPAQ9P0L0 249 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 C15orf41Q9Y2V0 281 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 KLF12Q9Y4X4 402 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 APC2O95996 2303 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 MGAQ8IWI9 3026 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 MYH11P35749 1972 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 MYOFQ9NZM1 2061 aa2.32□□□□□ -2.04
SMC4-224ENST00000494612 PLXNA2O75051 1894 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 HECTD1Q9ULT8 2610 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 MYH10P35580 1976 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 A0A0G2JMP0 313 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 A0A0X1KG70 313 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 ANKRD20A5PA0PJZ0 165 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 F8VP50 259 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 J3QT63 122 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 COCHO43405 550 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 HCRTO43612 131 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 NDUFS6O75380 124 aaKnown RBP2.31□□□□□ -2.04
SMC4-224ENST00000494612 DHRS3O75911 302 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 LHBP01229 141 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 MAS1P04201 325 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 MMP7P09237 267 aaPredicted RBP2.31□□□□□ -2.04
SMC4-224ENST00000494612 GIMD1P0DJR0 217 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 LIPCP11150 499 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 PAX6P26367 422 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 DNASE1L1P49184 302 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 TAS2R39P59534 338 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 ADIGQ0VDE8 80 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 STX4Q12846 297 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 IL15RAQ13261 267 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 BTN1A1Q13410 526 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 IGFBP7Q16270 282 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 SP6Q3SY56 376 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 SETD3Q86TU7 594 aaPredicted RBP2.31□□□□□ -2.04
SMC4-224ENST00000494612 SUN5Q8TC36 379 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 DOK4Q8TEW6 326 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 IFT81Q8WYA0 676 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 GTF2H4Q92759 462 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 ADTRPQ96IZ2 230 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 ZNF75AQ96N20 296 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 DERL3Q96Q80 235 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 LLPHQ9BRT6 129 aaKnown RBP2.31□□□□□ -2.04
SMC4-224ENST00000494612 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 OR51B5Q9H339 312 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 PLEKHA1Q9HB21 404 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 ASCL3Q9NQ33 180 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 NOSIPQ9Y314 301 aaKnown RBP2.31□□□□□ -2.04
SMC4-224ENST00000494612 ASXL3Q9C0F0 2248 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 CFAP46Q8IYW2 2715 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 BOD1L1Q8NFC6 3051 aa2.31□□□□□ -2.04
SMC4-224ENST00000494612 MYO18AQ92614 2054 aaKnown RBP2.3□□□□□ -2.04
SMC4-224ENST00000494612 GOLGA4Q13439 2230 aaKnown RBP2.3□□□□□ -2.04
SMC4-224ENST00000494612 IGHV6-1A0A0B4J1U7 121 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 A8MWL6 223 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 hCG_2039718K7EN88 272 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 NDUFS5O43920 106 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 ZMPSTE24O75844 475 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 TNFSF15O95150 251 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
SMC4-224ENST00000494612 TNNC2P02585 160 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 GNRHRP30968 328 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 RGS6P49758 472 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 OR2B6P58173 313 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 MLF1P58340 268 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 LINC00303Q3SY05 128 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 ACTL10Q5JWF8 245 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 FAM27D1Q5T7N8 215 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 RESP18Q5W5W9 173 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 FAM131AQ6UXB0 335 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 AHSA2Q719I0 299 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 DAZ4Q86SG3 579 aaKnown RBP2.3□□□□□ -2.04
SMC4-224ENST00000494612 CYP4Z1Q86W10 505 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 ATPAF2Q8N5M1 289 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 CDRT4Q8N9R6 151 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms