RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 C17orf100A8MU93 164 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 C15orf65H3BRN8 121 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 DEDDO75618 318 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 CYB5R3P00387 301 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-225ENST00000494465 MBPP02686 304 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-225ENST00000494465 RLN2P04090 185 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 CD55P08174 381 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 GRNP28799 593 aaKnown RBP13.8□□□□□ -0.2
ATG4B-225ENST00000494465 ZNRF1Q8ND25 227 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 OR52M1Q8NGK5 317 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 ERGIC1Q969X5 290 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 AQP10Q96PS8 301 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 NKX2-6A6NCS4 301 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 K7N7A8 449 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 OR8U9P0C7N5 309 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 SSTR5P35346 364 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 GNMTQ14749 295 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 C6orf183Q5T699 404 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 ZCCHC24Q8N2G6 241 aaKnown RBP13.79□□□□□ -0.2
ATG4B-225ENST00000494465 OR52L2PQ8NGH6 319 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 OR8U1Q8NH10 309 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 DNTTIP1Q9H147 329 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 DCAF16Q9NXF7 216 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 CCL8P80075 99 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 EDDM3AQ14507 147 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 OR5D13Q8NGL4 314 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 SCARB1Q8WTV0 552 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 RNASE6Q93091 150 aaKnown RBP13.79□□□□□ -0.2
ATG4B-225ENST00000494465 PLPPR2Q96GM1 343 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
ATG4B-225ENST00000494465 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
ATG4B-225ENST00000494465 MEX3AA1L020 520 aaKnown RBP13.78□□□□□ -0.2
ATG4B-225ENST00000494465 E7EQL1 145 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 MGST3O14880 152 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 IL2RGP31785 369 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 UBA52P62987 128 aaKnown RBP13.78□□□□□ -0.2
ATG4B-225ENST00000494465 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 STUMQ69YW2 141 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 ZNF695Q8IW36 515 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 DIRC2Q96SL1 478 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 ARPC5LQ9BPX5 153 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 PPP1R3CQ9UQK1 317 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 AUP1Q9Y679 476 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 COL6A6A6NMZ7 2263 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 ODAMA1E959 279 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 K7EPK0 472 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 SELLP14151 372 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 FAM71E2Q8N5Q1 922 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 OR51H1Q8NH63 302 aa13.78□□□□□ -0.2
ATG4B-225ENST00000494465 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
ATG4B-225ENST00000494465 PKDREJQ9NTG1 2253 aa13.77□□□□□ -0.2
ATG4B-225ENST00000494465 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-225ENST00000494465 TUBAL3A6NHL2 446 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 HKR1P10072 659 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 S100GP29377 79 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 ESCO2Q56NI9 601 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 LINC01560Q8TB33 94 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 IL22RA2Q969J5 263 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 ARL11Q969Q4 196 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 SDSLQ96GA7 329 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF471Q9BX82 626 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-225ENST00000494465 CYTL1Q9NRR1 136 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 LSM5Q9Y4Y9 91 aaKnown RBP13.77□□□□□ -0.21
ATG4B-225ENST00000494465 TANC2Q9HCD6 1990 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.21
ATG4B-225ENST00000494465 ARFGEF3Q5TH69 2177 aa13.77□□□□□ -0.21
ATG4B-225ENST00000494465 A0A1B0GW55 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUXBA0A1W2PPF3 345 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 SCGB1D2O95969 90 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L2P0CJ85 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L3P0CJ86 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L4P0CJ87 422 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L5P0CJ88 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L6P0CJ89 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L7P0CJ90 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 TLE1Q04724 770 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4L9Q6RFH8 374 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-225ENST00000494465 PPP1R35Q8TAP8 253 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 C5orf30Q96GV9 206 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 DUX4Q9UBX2 424 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 KCNS2Q9ULS6 477 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 RBM7Q9Y580 266 aaKnown RBP13.76□□□□□ -0.21
ATG4B-225ENST00000494465 LEUTXA8MZ59 168 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 F5H0A9 414 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-225ENST00000494465 NMBP08949 121 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 SFTPCP11686 197 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 PPP1CCP36873 323 aaKnown RBP13.76□□□□□ -0.21
ATG4B-225ENST00000494465 TEX36Q5VZQ5 186 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 TRAT1Q6PIZ9 186 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF561Q8N587 486 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 RFESDQ8TAC1 157 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 COQ3Q9NZJ6 369 aa13.76□□□□□ -0.21
ATG4B-225ENST00000494465 CLEC18AA5D8T8 446 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 ANKRD34BA5PLL1 514 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms