RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KCNIP1Q9NZI2 227 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 MTCH1Q9NZJ7 389 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 A0A0G2JMM0 328 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 A0A1W2PPB8 328 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 A0A1W2PRS3 328 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 FAM221AA4D161 298 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 KIR3DP1A8MWS1 328 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 C9JQL5 133 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 H3BQ15 152 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 SH2D1BO14796 132 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 CHST1O43916 411 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 EIF3GO75821 320 aaKnown RBP eCLIP9.78□□□□□ -0.84
RFC4-214ENST00000494047 NEURL1O76050 574 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 OPN1MWP04001 364 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 SRP19P09132 144 aaKnown RBP9.78□□□□□ -0.84
RFC4-214ENST00000494047 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 CD46P15529 392 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 S100A2P29034 98 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 NTF4P34130 210 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 RPS23P62266 143 aaKnown RBP9.78□□□□□ -0.84
RFC4-214ENST00000494047 RPS18P62269 152 aaKnown RBP9.78□□□□□ -0.84
RFC4-214ENST00000494047 PLGLB1Q02325 96 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 Q0VFX4 171 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 OR1C1Q15619 314 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 SP5Q6BEB4 398 aaPredicted RBP9.78□□□□□ -0.84
RFC4-214ENST00000494047 PCSK4Q6UW60 755 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 MRGPRGQ86SM5 289 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 ZNF429Q86V71 674 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 ZFP62Q8NB50 900 aaPredicted RBP9.78□□□□□ -0.84
RFC4-214ENST00000494047 CLDND2Q8NHS1 167 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 DYRK2Q92630 601 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 MUCL1Q96DR8 90 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 SSX3Q99909 188 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 TTTY12Q9BZ98 90 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 SPRY4Q9C004 299 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 TOLLIPQ9H0E2 274 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 OR51M1Q9H341 326 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 CALHM2Q9HA72 323 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 RAB9BQ9NP90 201 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 DEPPQ9NTK1 212 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 TAAR3PQ9P1P4 343 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 WIPI2Q9Y4P8 454 aa9.78□□□□□ -0.84
RFC4-214ENST00000494047 LOC102723971A0A1B0GUV8 181 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 A0A1W2PPH5 198 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 HSD17B6O14756 317 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 ATXN7O15265 892 aaPredicted RBP9.77□□□□□ -0.84
RFC4-214ENST00000494047 CYB5R3P00387 301 aaPredicted RBP9.77□□□□□ -0.84
RFC4-214ENST00000494047 SCTP09683 121 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 BCL2P10415 239 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 RAC2P15153 192 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 CCNOP22674 350 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 PPP1CCP36873 323 aaKnown RBP9.77□□□□□ -0.84
RFC4-214ENST00000494047 GLIPR1P48060 266 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 FABP9Q0Z7S8 132 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 HERPUD1Q15011 391 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 ZNF146Q15072 292 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 TMEM41BQ5BJD5 291 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 DMRTC1Q5HYR2 192 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 FBXW9Q5XUX1 488 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 SPSB3Q6PJ21 355 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 ZNF497Q6ZNH5 498 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 TUSC5Q8IXB3 177 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 LILRB2Q8N423 598 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 TMEM178AQ8NBL3 297 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 OR1K1Q8NGR3 316 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 FGFBP3Q8TAT2 258 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 C2CD4CQ8TF44 421 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 TMEM171Q8WVE6 324 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 ZNF845Q96IR2 970 aaPredicted RBP9.77□□□□□ -0.84
RFC4-214ENST00000494047 AGMATQ9BSE5 352 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 MAGT1Q9H0U3 335 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 OR51I2Q9H344 312 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 MANBALQ9NQG1 85 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 CCL28Q9NRJ3 127 aa9.77□□□□□ -0.84
RFC4-214ENST00000494047 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.84
RFC4-214ENST00000494047 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.84
RFC4-214ENST00000494047 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 PCP4L1A6NKN8 68 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 A6NLC8 198 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 FAM90A9PA6NNJ1 464 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 TMEM250H0YL14 139 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 CLDN34H7C241 214 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 PPIHO43447 177 aaKnown RBP9.76□□□□□ -0.85
RFC4-214ENST00000494047 PATE4P0C8F1 98 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 OR13C7P0DN81 318 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 PAX5Q02548 391 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 DAZAP2Q15038 168 aaPredicted RBP9.76□□□□□ -0.85
RFC4-214ENST00000494047 TGIF1Q15583 401 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 DCAF10Q5QP82 559 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 PLPPR1Q8TBJ4 325 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 WNT2BQ93097 391 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 GMPPAQ96IJ6 420 aaPredicted RBP9.76□□□□□ -0.85
RFC4-214ENST00000494047 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 VAX2Q9UIW0 290 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 RBM7Q9Y580 266 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms