RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 IGKV1D-12P01611 117 aa9.47□□□□□ -0.89
COL2A1-208ENST00000493991 TRGC2P03986 189 aa9.47□□□□□ -0.89
COL2A1-208ENST00000493991 CXorf66Q5JRM2 361 aaPredicted RBP9.47□□□□□ -0.89
COL2A1-208ENST00000493991 NSUN5P2Q63ZY6 315 aa9.47□□□□□ -0.89
COL2A1-208ENST00000493991 PPP1R35Q8TAP8 253 aa9.47□□□□□ -0.89
COL2A1-208ENST00000493991 CCL17Q92583 94 aa9.47□□□□□ -0.89
COL2A1-208ENST00000493991 ALX4Q9H161 411 aaPredicted RBP9.47□□□□□ -0.89
COL2A1-208ENST00000493991 LOC102724200A0A096LPH7 203 aaPredicted RBP9.46□□□□□ -0.89
COL2A1-208ENST00000493991 SLC25A4P12235 298 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 CCL8P80075 99 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 BAXQ07812 192 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 PROK2Q9HC23 129 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 GCM1Q9NP62 436 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 SLC39A9Q9NUM3 307 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 SEMA5BQ9P283 1151 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 MGAQ8IWI9 3026 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 TMEM127O75204 238 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 CSRP2Q16527 193 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 C10orf128Q5T292 105 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.89
COL2A1-208ENST00000493991 LEAP2Q969E1 77 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 TMEM54Q969K7 222 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 TVP23CQ96ET8 276 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 Q96M66 194 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 ABHD14AQ9BUJ0 271 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 RNF126Q9BV68 326 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 DDA1Q9BW61 102 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 OR2D2Q9H210 308 aa9.46□□□□□ -0.89
COL2A1-208ENST00000493991 ARFGEF3Q5TH69 2177 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 PROB1E7EW31 1015 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 TAAR5O14804 337 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 MPPED1O15442 326 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 SPINT2O43291 252 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 ERVK-16P61578 105 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 RNFT1Q5M7Z0 435 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 OR52M1Q8NGK5 317 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
COL2A1-208ENST00000493991 MALRD1Q5VYJ5 2156 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 ADAMTS9Q9P2N4 1935 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 IGKV1-27A0A075B6S5 117 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 C9JQL5 133 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 CHST1O43916 411 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 CD74P04233 296 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 LHX2P50458 406 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 UBE2G2P60604 165 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 H3F3AP84243 136 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 ZNF345Q14585 488 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 HMGN3Q15651 99 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 WDR25Q64LD2 544 aaPredicted RBP9.45□□□□□ -0.9
COL2A1-208ENST00000493991 FAM214BQ7L5A3 538 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 MOGAT3Q86VF5 341 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 TGIF2LXQ8IUE1 241 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 RNF166Q96A37 237 aaPredicted RBP9.45□□□□□ -0.9
COL2A1-208ENST00000493991 NABP1Q96AH0 204 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 GALMQ96C23 342 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 ABHD14BQ96IU4 210 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 OR1A1Q9P1Q5 309 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 H3BQ15 152 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 ACTL6BO94805 426 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 SNRPCP09234 159 aaKnown RBP9.45□□□□□ -0.9
COL2A1-208ENST00000493991 DLK1P80370 383 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 ZNF154Q13106 437 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 PRAMEF5Q5TYX0 476 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 COMMD1Q8N668 190 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 MARS2Q96GW9 593 aaKnown RBP9.45□□□□□ -0.9
COL2A1-208ENST00000493991 DCTN5Q9BTE1 182 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 SLC2A8Q9NY64 477 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 COA4Q9NYJ1 87 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 DOK5Q9P104 306 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 TP53TG5Q9Y2B4 290 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 SPINK4O60575 86 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 CLDN18P56856 261 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 HABP2Q14520 560 aaPredicted RBP9.45□□□□□ -0.9
COL2A1-208ENST00000493991 SLC25A53Q5H9E4 307 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 H2BFWTQ7Z2G1 175 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 PNRC2Q9NPJ4 139 aaKnown RBP9.45□□□□□ -0.9
COL2A1-208ENST00000493991 KIAA1549LQ6ZVL6 1849 aa9.45□□□□□ -0.9
COL2A1-208ENST00000493991 NPIPB13A6NJU9 1138 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 FAM90A27PA6NNH2 459 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 NPIPB4C9JG80 1138 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 M0R1X1 148 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 PSG2P11465 335 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 CATR1Q13166 79 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 ZNF266Q14584 549 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 ZNF66Q6ZN08 573 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 MTCH1Q9NZJ7 389 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 TAAR3PQ9P1P4 343 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 ST8SIA5O15466 376 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 FCGR3BO75015 233 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 CTSDP07339 412 aaPredicted RBP9.44□□□□□ -0.9
COL2A1-208ENST00000493991 ZNF735P0CB33 412 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 TNFSF4P23510 183 aa9.44□□□□□ -0.9
COL2A1-208ENST00000493991 DHRS7BQ6IAN0 325 aaPredicted RBP9.44□□□□□ -0.9
COL2A1-208ENST00000493991 LHX4Q969G2 390 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms