RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ARR3P36575 388 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 LPAR6P43657 344 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 CSNK1A1P48729 337 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM241Q24JQ0 296 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 ALKBH6Q3KRA9 238 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 LRRC37A5PQ49AS3 106 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 COA6Q5JTJ3 125 aaKnown RBP6.92□□□□□ -1.3
HDAC6-234ENST00000493923 SOHLH1Q5JUK2 328 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 CLEC12AQ5QGZ9 265 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 FAM120AOSQ5T036 256 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 FAAP20Q6NZ36 180 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 SUMF2Q8NBJ7 301 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 CD300LFQ8TDQ1 290 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM255BQ8WV15 326 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 MRPL24Q96A35 216 aaKnown RBP6.92□□□□□ -1.3
HDAC6-234ENST00000493923 ISOC2Q96AB3 205 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 ACY3Q96HD9 319 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 DERL3Q96Q80 235 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 GPA33Q99795 319 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 FOXB1Q99853 325 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 PCGF1Q9BSM1 259 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 SELENOIQ9C0D9 397 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 ADGRL4Q9HBW9 690 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 C20orf141Q9NUB4 165 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM242Q9NWH2 141 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM160Q9NX00 188 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 VAX2Q9UIW0 290 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 GNG8Q9UK08 70 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 KIR2DL5BA0A0G2JN68 375 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 KIR2DL5BA0A0G2JPC4 375 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 A0A1W2PPE2 198 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM235A6NFC5 223 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF736B4DX44 427 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-234ENST00000493923 K7EPK0 472 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 DOK2O60496 412 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 TGFAP01135 160 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 CSTBP04080 98 aaKnown RBP6.91□□□□□ -1.3
HDAC6-234ENST00000493923 F13BP05160 661 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 ASAH2BP0C7U1 165 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 PGA4P0DJD7 388 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 PGA3P0DJD8 388 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 SLC2A5P22732 501 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 AQP2P41181 271 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 OR12D2P58182 307 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 IL13RA1P78552 427 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 PNRC1Q12796 327 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-234ENST00000493923 ZP4Q12836 540 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 PLA2G7Q13093 441 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 CR1LQ2VPA4 569 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 Q499Y3 187 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 C1orf194Q5T5A4 169 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM268Q5VZI3 342 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 LEMD1Q68G75 181 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 SSX7Q7RTT5 188 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 FAM220AQ7Z4H9 259 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 THNSL2Q86YJ6 484 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 KIR2DL5AQ8N109 375 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 FAM71E2Q8N5Q1 922 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 NKAIN3Q8N8D7 197 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 BBS1Q8NFJ9 593 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 OR51F2Q8NH61 342 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 NPRL2Q8WTW4 380 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 TBX5Q99593 518 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 SLC5A7Q9GZV3 580 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 PLEKHA2Q9HB19 425 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 GPR173Q9NS66 373 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM38BQ9NVV0 291 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF230Q9UIE0 474 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-234ENST00000493923 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
HDAC6-234ENST00000493923 K7EP13 123 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 DHHO43323 396 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SLC2A10O95528 541 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 MT-ATP6P00846 226 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 PPBPP02775 128 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 CD3DP04234 171 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SFTPBP07988 381 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 CST2P09228 141 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SNRPCP09234 159 aaKnown RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 MMP7P09237 267 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 GZMBP10144 247 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 CD37P11049 281 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 CDAP32320 146 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 GLRXP35754 106 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 AKR1C3P42330 323 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 KLF3P57682 345 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 RPS20P60866 119 aaKnown RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 RPS11P62280 158 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 FMODQ06828 376 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 RPL18Q07020 188 aaKnown RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 FHL1Q13642 323 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 HIST3H3Q16695 136 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SPRNQ5BIV9 151 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 COL5A1-AS1Q5SY13 56 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 FAM166AQ6J272 317 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SLC25A26Q70HW3 274 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SLC35E3Q7Z769 313 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms