RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 IL3RAP26951 378 aa18.07■□□□□ 0.48
SNIP1-203ENST00000493916 PSMB9P28065 219 aa18.07■□□□□ 0.48
SNIP1-203ENST00000493916 Q6ZS46 218 aa18.07■□□□□ 0.48
SNIP1-203ENST00000493916 WIPF2Q8TF74 440 aaPredicted RBP18.07■□□□□ 0.48
SNIP1-203ENST00000493916 WNT10AQ9GZT5 417 aa18.07■□□□□ 0.48
SNIP1-203ENST00000493916 STEAP1Q9UHE8 339 aa18.07■□□□□ 0.48
SNIP1-203ENST00000493916 CMYA5Q8N3K9 4069 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 SHISA3A0PJX4 238 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 FOXI3A8MTJ6 420 aaPredicted RBP18.06■□□□□ 0.48
SNIP1-203ENST00000493916 LDLRAD4O15165 306 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 NAPSAO96009 420 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 GAPDHP04406 335 aaKnown RBP18.06■□□□□ 0.48
SNIP1-203ENST00000493916 VDAC2P45880 294 aaPredicted RBP18.06■□□□□ 0.48
SNIP1-203ENST00000493916 ZNF137PP52743 207 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 CLDN12P56749 244 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 HTD2P86397 168 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 HMGN3Q15651 99 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 C2orf68Q2NKX9 166 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 STEAP3Q658P3 488 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 OR10V1Q8NGI7 309 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 ST6GALNAC6Q969X2 333 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 MMP27Q9H306 513 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 PLEKHJ1Q9NW61 149 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 JPT1Q9UK76 154 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 HSF4Q9ULV5 492 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 MOB4Q9Y3A3 225 aa18.06■□□□□ 0.48
SNIP1-203ENST00000493916 IGHV1-3A0A0C4DH29 117 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 SLC31A2O15432 143 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 SOCS1O15524 211 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 AMY1AP04745 511 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 AMY2AP04746 511 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 C2orf76Q3KRA6 126 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 ARSJQ5FYB0 599 aaPredicted RBP18.05■□□□□ 0.48
SNIP1-203ENST00000493916 HES5Q5TA89 166 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 ZNF880Q6PDB4 577 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 MOB1BQ7L9L4 216 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 RIMS4Q9H426 269 aaPredicted RBP18.05■□□□□ 0.48
SNIP1-203ENST00000493916 OR2S2Q9NQN1 319 aa18.05■□□□□ 0.48
SNIP1-203ENST00000493916 TRBV6-6A0A0A6YYG2 114 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 TXNL1O43396 289 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 FGF9P31371 208 aaPredicted RBP18.04■□□□□ 0.48
SNIP1-203ENST00000493916 ZNF134P52741 427 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 OR10A3P58181 314 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 KCTD21Q4G0X4 260 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 CT45A1Q5HYN5 189 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 LY6G6FQ5SQ64 297 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 C22orf42Q6IC83 251 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 IZUMO1Q8IYV9 350 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 CT45A3Q8NHU0 189 aa18.04■□□□□ 0.48
SNIP1-203ENST00000493916 RTN4IP1Q8WWV3 396 aaPredicted RBP18.04■□□□□ 0.48
SNIP1-203ENST00000493916 TMEM272A0A1B0GTI8 110 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 IFITM5A6NNB3 132 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 LPLP06858 475 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 TMEM11P17152 192 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 RAB3BP20337 219 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 REG1BP48304 166 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 EBI3Q14213 229 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 GNMTQ14749 295 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 TMEM95Q3KNT9 176 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 ABCA11PQ4W5N1 156 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 MORN2Q502X0 79 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 Q6ZPA2 131 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 OR56B1Q8NGI3 324 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 GALMQ96C23 342 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 CHMP1AQ9HD42 196 aaPredicted RBP18.03■□□□□ 0.48
SNIP1-203ENST00000493916 ABRACLQ9P1F3 81 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 AK3Q9UIJ7 227 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 RAB22AQ9UL26 194 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 STUB1Q9UNE7 303 aa18.03■□□□□ 0.48
SNIP1-203ENST00000493916 PEX14O75381 377 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 FBXO24O75426 580 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 TSPAN15O95858 294 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 IGKV1D-33P01593 117 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 IGKV1-33P01594 117 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 VEGFCP49767 419 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 TMEM50BP56557 158 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 HES1Q14469 280 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 MOB3BQ86TA1 216 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 OR52L2PQ8NGH6 319 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 ABHD14AQ9BUJ0 271 aa18.02■□□□□ 0.48
SNIP1-203ENST00000493916 TET2Q6N021 2002 aaPredicted RBP18.01■□□□□ 0.47
SNIP1-203ENST00000493916 FGF16O43320 207 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 YPEL1O60688 119 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 RGS11O94810 467 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 CSF1P09603 554 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 PPP1CCP36873 323 aaKnown RBP18.01■□□□□ 0.47
SNIP1-203ENST00000493916 C5orf24Q7Z6I8 188 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 C11orf44Q8N8P7 122 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 ARHGAP5-AS1Q96IT6 56 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 YPEL2Q96QA6 119 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 PECRQ9BY49 303 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 C12orf4Q9NQ89 552 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 TXNL4BQ9NX01 149 aaKnown RBP18.01■□□□□ 0.47
SNIP1-203ENST00000493916 MGAT4AQ9UM21 535 aa18.01■□□□□ 0.47
SNIP1-203ENST00000493916 LANCL1O43813 399 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 CD1BP29016 333 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 PLA2G7Q13093 441 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 PLAC9Q5JTB6 97 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 NR2C2APQ86WQ0 139 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 TGIF2LXQ8IUE1 241 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms