RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 GLP1RP43220 463 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 CBX5P45973 191 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 INPP1P49441 399 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 SUMO1P63165 101 aaKnown RBP9.97□□□□□ -0.81
UPF3A-210ENST00000493727 DGCR2P98153 550 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF79Q15937 498 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 TRIQKQ629K1 86 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 SLC35E4Q6ICL7 350 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF497Q6ZNH5 498 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 MOB1BQ7L9L4 216 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 FAM185AQ8N0U4 392 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 Q8N402 240 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 TPRX1Q8N7U7 411 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 ZDHHC22Q8N966 263 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 GDPD1Q8N9F7 314 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 OR4K15Q8NH41 348 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 OR52I2Q8NH67 350 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 CCDC107Q8WV48 283 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 COQ2Q96H96 371 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 SOSTQ9BQB4 213 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 SSBP3Q9BWW4 388 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-210ENST00000493727 SRRQ9GZT4 340 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 KIF25Q9UIL4 384 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 INSIG2Q9Y5U4 225 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 TRGV10A0A0A0MS01 117 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 A0A1W2PQ09 198 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 ODAMA1E959 279 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 MEIOCA2RUB1 952 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 FCER2P06734 321 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 FCGR3AP08637 254 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 PPIAL4GP0DN37 164 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 HKR1P10072 659 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 PRTN3P24158 256 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 ERP29P30040 261 aaKnown RBP9.96□□□□□ -0.82
UPF3A-210ENST00000493727 GLIPR1P48060 266 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 ACTBP60709 375 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 RPL31P62899 125 aaKnown RBP9.96□□□□□ -0.82
UPF3A-210ENST00000493727 C6orf183Q5T699 404 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 RSBN1Q5VWQ0 802 aaPredicted RBP9.96□□□□□ -0.82
UPF3A-210ENST00000493727 WDR25Q64LD2 544 aaPredicted RBP9.96□□□□□ -0.82
UPF3A-210ENST00000493727 BTNL3Q6UXE8 466 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 FGFRL1Q8N441 504 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 MRPL30Q8TCC3 161 aaKnown RBP9.96□□□□□ -0.82
UPF3A-210ENST00000493727 GPX8Q8TED1 209 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 SMIM4Q8WVI0 70 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 ST6GALNAC5Q9BVH7 336 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF286AQ9HBT8 521 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 MMP26Q9NRE1 261 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.82
UPF3A-210ENST00000493727 hADV38S2A0JD32 116 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 DBX1A6NMT0 343 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 J3QRK9 145 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 SSX5O60225 188 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 RBBP9O75884 186 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 NAPSAO96009 420 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 MT-ND4P03905 459 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 CD40LGP29965 261 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 RCVRNP35243 200 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 PPP5CP53041 499 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 SEC61A1P61619 476 aaKnown RBP9.95□□□□□ -0.82
UPF3A-210ENST00000493727 CD276Q5ZPR3 534 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 BTN2A1Q7KYR7 527 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 SIGLECL1Q8N7X8 197 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 MRGPRDQ8TDS7 321 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 C22orf15Q8WYQ4 148 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 MAFIPQ8WZ33 124 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 THAP7Q9BT49 309 aaPredicted RBP9.95□□□□□ -0.82
UPF3A-210ENST00000493727 CCDC32Q9BV29 185 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF747Q9BV97 191 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF230Q9UIE0 474 aaPredicted RBP9.95□□□□□ -0.82
UPF3A-210ENST00000493727 MGAT4AQ9UM21 535 aa9.95□□□□□ -0.82
UPF3A-210ENST00000493727 TRAV39A0A0B4J263 110 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 KIR2DS1A0A191URI9 304 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 MEX3AA1L020 520 aaKnown RBP9.94□□□□□ -0.82
UPF3A-210ENST00000493727 NPIPB6E9PJ23 425 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 GSTZ1O43708 216 aaPredicted RBP9.94□□□□□ -0.82
UPF3A-210ENST00000493727 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
UPF3A-210ENST00000493727 GSTT2BP0CG30 244 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 KIR2DS4P43632 304 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 ARPC4P59998 168 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 PAX5Q02548 391 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 MEF2CQ06413 473 aaPredicted RBP9.94□□□□□ -0.82
UPF3A-210ENST00000493727 PAX8Q06710 450 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 KIR2DS1Q14954 304 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF57Q68EA5 555 aaPredicted RBP9.94□□□□□ -0.82
UPF3A-210ENST00000493727 TRAT1Q6PIZ9 186 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF841Q6ZN19 808 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 PRR18Q8N4B5 295 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 GVQW1Q8N7I0 195 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 DCTN5Q9BTE1 182 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 MS4A7Q9GZW8 240 aaPredicted RBP9.94□□□□□ -0.82
UPF3A-210ENST00000493727 RAB9BQ9NP90 201 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 C19orf12Q9NSK7 152 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF69Q9UC07 566 aa9.94□□□□□ -0.82
UPF3A-210ENST00000493727 TRBV6-6A0A0A6YYG2 114 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 A0A1W2PPH5 198 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 DNAJC9-AS1A6NH13 148 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms