RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 AKIP1Q9NQ31 210 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 OR2S2Q9NQN1 319 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 SLC23A1Q9UHI7 598 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 POM121CA8CG34 1229 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 CTDSPLO15194 276 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 HSPA12AO43301 675 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 RBP4P02753 201 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 PRTN3P24158 256 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 HLA-DMAP28067 261 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 RCVRNP35243 200 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 PPP1CCP36873 323 aaKnown RBP14.05□□□□□ -0.16
LIME1-208ENST00000493265 MRPS10P82664 201 aaKnown RBP14.05□□□□□ -0.16
LIME1-208ENST00000493265 C1orf229Q6ZS94 237 aaPredicted RBP14.05□□□□□ -0.16
LIME1-208ENST00000493265 C1orf122Q6ZSJ8 110 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 ZNF554Q86TJ5 538 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 Q8N402 240 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 OR4A4PQ8NGN8 299 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 TMEM133Q9H2Q1 129 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 HEXA-AS1Q9H8Q6 139 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 OR1A1Q9P1Q5 309 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 MTFP1Q9UDX5 166 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 ANXA10Q9UJ72 324 aa14.05□□□□□ -0.16
LIME1-208ENST00000493265 TRAV40A0A0B4J280 105 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 IGKV1-6A0A0C4DH72 117 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 A0A1W2PPE3 182 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 RNASEK-C17orf49H0YIS7 233 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 F2RL2O00254 374 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 LANCL1O43813 399 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 PMP2P02689 132 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 PTBP1P26599 531 aaKnown RBP eCLIP14.04□□□□□ -0.16
LIME1-208ENST00000493265 ACTBP60709 375 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 ACTG1P63261 375 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 ZNF45Q02386 682 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 HERPUD1Q15011 391 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 SRSF7Q16629 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
LIME1-208ENST00000493265 OR13D1Q8NGV5 346 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 S100ZQ8WXG8 99 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 GINS4Q9BRT9 223 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 THAP7Q9BT49 309 aaPredicted RBP14.04□□□□□ -0.16
LIME1-208ENST00000493265 SRRQ9GZT4 340 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 LINC00574Q9H8X3 128 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 GFOD1Q9NXC2 390 aa14.04□□□□□ -0.16
LIME1-208ENST00000493265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.03□□□□□ -0.164e-7■■■■□ 21.5
LIME1-208ENST00000493265 GSTZ1O43708 216 aaPredicted RBP14.03□□□□□ -0.16
LIME1-208ENST00000493265 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 CEACAM6P40199 344 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 OR3A3P47888 321 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 LOXL3P58215 753 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 FAM120AOSQ5T036 256 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 NCR3LG1Q68D85 454 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 Q6ZS49 121 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 LINC00299Q6ZSB3 139 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 LYSMD2Q8IV50 215 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 ABHD12Q8N2K0 398 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 OR10A7Q8NGE5 316 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 OR5H2Q8NGV7 314 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 OR10J5Q8NHC4 309 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 TNFRSF14Q92956 283 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 UPRTQ96BW1 309 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 ANAPC10Q9UM13 185 aa14.03□□□□□ -0.16
LIME1-208ENST00000493265 WNK2Q9Y3S1 2297 aa14.02□□□□□ -0.16
LIME1-208ENST00000493265 IGHV2-26A0A0B4J1V2 119 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 CENPVL3A0A0U1RRI6 287 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 J3QRK9 145 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 M0QYG6 137 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 TOR1AO14656 332 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 ZBTB25P24278 435 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 RFX2P48378 723 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 HTD2P86397 168 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 ZNF846Q147U1 533 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 GPR157Q5UAW9 335 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 RUSC1-AS1Q66K80 236 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 HCP5Q6MZN7 132 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 OR5AP2Q8NGF4 316 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 TMEM158Q8WZ71 300 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 CLEC7AQ9BXN2 247 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 PARP12Q9H0J9 701 aaKnown RBP14.02□□□□□ -0.17
LIME1-208ENST00000493265 NECAP2Q9NVZ3 263 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 EHFQ9NZC4 300 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 ZNRD1Q9P1U0 126 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 ZNF69Q9UC07 566 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 JPT1Q9UK76 154 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 PSG11Q9UQ72 335 aa14.02□□□□□ -0.17
LIME1-208ENST00000493265 ZNF736B4DX44 427 aaPredicted RBP14.01□□□□□ -0.17
LIME1-208ENST00000493265 CD3DP04234 171 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 ARG1P05089 322 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 NAT1P18440 290 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 NFYAP23511 347 aaPredicted RBP14.01□□□□□ -0.17
LIME1-208ENST00000493265 HRH1P35367 487 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 SRP14P37108 136 aaKnown RBP14.01□□□□□ -0.17
LIME1-208ENST00000493265 INPP1P49441 399 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 CDK10Q15131 360 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 BAK1Q16611 211 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 KLF17Q5JT82 389 aaPredicted RBP14.01□□□□□ -0.17
LIME1-208ENST00000493265 TRIQKQ629K1 86 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 STEAP3Q658P3 488 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 BRD3OSQ6XYD6 125 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 GDPD1Q8N9F7 314 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 OR52M1Q8NGK5 317 aa14.01□□□□□ -0.17
LIME1-208ENST00000493265 CABLES2Q9BTV7 478 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms