RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 SSBP1Q04837 148 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 KISS1Q15726 138 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 OR13C6PQ8NH95 151 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 YIPF5Q969M3 257 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 PILRAQ9UKJ1 303 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 J3QR06 171 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 APELAP0DMC3 54 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 SLC25A1P53007 311 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 FOXL1Q12952 345 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 FXYD3Q14802 87 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 SCN9AQ15858 1988 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 RBMY1BA6NDE4 496 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 RBMY1EA6NEQ0 496 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 DNAL4O96015 105 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 RBMY1DP0C7P1 496 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 RBMY1A1P0DJD3 496 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 RBMY1CP0DJD4 496 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 CCR6P51684 374 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 TMUB2Q71RG4 321 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 PPP1R27Q86WC6 154 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 Q8NFD4 153 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 TMEM54Q969K7 222 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 WDFY2Q96P53 400 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 RTN4RQ9BZR6 473 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 RPRMQ9NS64 109 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 H3BRM9 83 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 HMGN4O00479 90 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 TGOLN2O43493 480 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 PAX1P15863 534 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 MAGEB1P43366 347 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 RPS10P46783 165 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 METAP1P53582 386 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ZP4Q12836 540 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ELOBQ15370 118 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ECM29Q5VYK3 1845 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 SHANK3Q9BYB0 1731 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 IL18BPO95998 194 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 TMEM179BQ7Z7N9 219 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 MYPOPQ86VE0 399 aaPredicted RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 AMER3Q8N944 861 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 OR8G5Q8NG78 346 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ZNF501Q96CX3 271 aaPredicted RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 GABARAPL3Q9BY60 117 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 BCL2L10Q9HD36 194 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 RD3LP0DJH9 198 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 HOXD13P35453 343 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ASIPP42127 132 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 SLC6A12P48065 614 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 CLDN12P56749 244 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ZP1P60852 638 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 ACP7Q6ZNF0 438 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 GAPTQ8N292 157 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 C11orf44Q8N8P7 122 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 OR1K1Q8NGR3 316 aa4.69□□□□□ -1.66
FN1-224ENST00000492816 EXOGQ9Y2C4 368 aaKnown RBP4.69□□□□□ -1.66
FN1-224ENST00000492816 IGKV3-20P01619 116 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 MUC1P15941 1255 aaPredicted RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 PMELP40967 661 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ISL1P61371 349 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 SELENOTP62341 195 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 SLC38A11Q08AI6 406 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ZNF429Q86V71 674 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 LRP12Q9Y561 859 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 SNRPBP14678 240 aaKnown RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 HIST1H1AQ02539 215 aaPredicted RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 PRICKLE4Q2TBC4 344 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 SYS1Q8N2H4 156 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ARPC1AQ92747 370 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 KIR2DL4Q99706 377 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 SEC11CQ9BY50 192 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 BTG1P62324 171 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 SRSF9Q13242 221 aaKnown RBP eCLIP4.68□□□□□ -1.66
FN1-224ENST00000492816 COTL1Q14019 142 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 TWIST1Q15672 202 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 KIAA1644Q3SXP7 199 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 C3orf36Q3SXR2 165 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 Q6ZT83 130 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ZNF534Q76KX8 674 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 OR4C16Q8NGL9 310 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ANGPTL4Q9BY76 406 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 GAB2Q9UQC2 676 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 MMP24Q9Y5R2 645 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 LIPT2A6NK58 231 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ZNF729A6NN14 1252 aaPredicted RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 CYB5R3P00387 301 aaPredicted RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 NSUN5P2Q63ZY6 315 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 PRSS54Q6PEW0 395 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 LCN15Q6UWW0 184 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ZDHHC24Q6UX98 284 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 BPIFA4PQ86YQ2 179 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 TTC9CQ8N5M4 171 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 ALS2Q96Q42 1657 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 RER1O15258 196 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 PLAUP00749 431 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 GPX4P36969 197 aaPredicted RBP4.68□□□□□ -1.66
FN1-224ENST00000492816 CX3CL1P78423 397 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 OTOSQ8NHW6 89 aa4.68□□□□□ -1.66
FN1-224ENST00000492816 HMGCLL1Q8TB92 370 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms