RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CLCF1Q9UBD9 225 aa10.52□□□□□ -0.72
HMGN1-220ENST00000492280 TXNL1O43396 289 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 TSPAN9O75954 239 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 SNAPINO95295 136 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 FBP1P09467 338 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 SNCAP37840 140 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 AESQ08117 197 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 OR8G1Q15617 311 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 FAM214BQ7L5A3 538 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 H1FOOQ8IZA3 346 aaPredicted RBP10.52□□□□□ -0.73
HMGN1-220ENST00000492280 SPAG16Q8N0X2 631 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 OR10Z1Q8NGY1 313 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 GINS3Q9BRX5 216 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 DCTN5Q9BTE1 182 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 SPACA1Q9HBV2 294 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 CACNG5Q9UF02 275 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 ZZEF1O43149 2961 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 ARFGEF3Q5TH69 2177 aa10.52□□□□□ -0.73
HMGN1-220ENST00000492280 SERPINE2P07093 398 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 VDAC1P21796 283 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 UCP2P55851 309 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 GABRA6Q16445 453 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 BTNL3Q6UXE8 466 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 OR10V1Q8NGI7 309 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 RFESDQ8TAC1 157 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 ASCL3Q9NQ33 180 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 DEFB108AA8MXU0 73 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 CEACAM6P40199 344 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 KIR2DL2P43627 348 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-220ENST00000492280 PAX9P55771 341 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 Q6ZS49 121 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 RXFP4Q8TDU9 374 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 TAAR6Q96RI8 345 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 CLCC1Q96S66 551 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 ARV1Q9H2C2 271 aa10.51□□□□□ -0.73
HMGN1-220ENST00000492280 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-220ENST00000492280 M0R036 132 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 GALR2O43603 387 aaPredicted RBP10.5□□□□□ -0.73
HMGN1-220ENST00000492280 CTRB1P17538 263 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 OR3A1P47881 315 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 DVL1P1P54792 670 aaPredicted RBP10.5□□□□□ -0.73
HMGN1-220ENST00000492280 HAGHQ16775 308 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 AWAT1Q58HT5 328 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 GPR157Q5UAW9 335 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 CTRB2Q6GPI1 263 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 OR52L2PQ8NGH6 319 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 CD300LFQ8TDQ1 290 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 AIFM2Q9BRQ8 373 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 SCRT1Q9BWW7 348 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 RPS10P5Q9NQ39 176 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 MLXQ9UH92 298 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 LRBAP50851 2863 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 H0Y980 276 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 RAMP3O60896 148 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 AKR1D1P51857 326 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 SPINK9Q5DT21 86 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 FAM185AQ8N0U4 392 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 MRGPRDQ8TDS7 321 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
HMGN1-220ENST00000492280 LRP5LA4QPB2 252 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PCP4L1A6NKN8 68 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 K7N7A8 449 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 HAND1O96004 215 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 CECR9P0C854 216 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PGA5P0DJD9 388 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 SSTR5P35346 364 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 RPL35P42766 123 aaKnown RBP10.49□□□□□ -0.73
HMGN1-220ENST00000492280 RND3P61587 244 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 SRPXP78539 464 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 TGFBR3Q03167 851 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 DHRS7BQ6IAN0 325 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-220ENST00000492280 ZNF497Q6ZNH5 498 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 C14orf79Q96F83 325 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PKIBQ9C010 78 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PLK3Q9H4B4 646 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 OPA3Q9H6K4 179 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
HMGN1-220ENST00000492280 IGF2RP11717 2491 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 HCFC1P51610 2035 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PTPRBP23467 1997 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 KIAA1324LA8MWY0 1029 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-220ENST00000492280 H7C2Y5 167 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PTBP3O95758 552 aaKnown RBP10.49□□□□□ -0.73
HMGN1-220ENST00000492280 ARG1P05089 322 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 CRYBA1P05813 215 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 ERVK11-1P61568 191 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 ID3Q02535 119 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 ZNF816Q0VGE8 651 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-220ENST00000492280 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 PIP4P1Q86T03 277 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 ZNF610Q8N9Z0 462 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 SPIN2AQ99865 258 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 SPIN2BQ9BPZ2 258 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
HMGN1-220ENST00000492280 TIMM8AO60220 97 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms