RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
TOM1-215ENST00000491987 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
TOM1-215ENST00000491987 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
TOM1-215ENST00000491987 TSSC4Q9Y5U2 329 aaPredicted RBP11.89□□□□□ -0.51
TOM1-215ENST00000491987 PSMB11A5LHX3 300 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 SLC22A1O15245 554 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 CRHBPP24387 322 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 HTR2CP28335 458 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 UNC119Q13432 240 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 EBI3Q14213 229 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 GNMTQ14749 295 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 CT45A1Q5HYN5 189 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
TOM1-215ENST00000491987 C6orf201Q7Z4U5 140 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 TGIF2LXQ8IUE1 241 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 OR52L2PQ8NGH6 319 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 OR2T10Q8NGZ9 312 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 CT45A3Q8NHU0 189 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 NOL4LQ96MY1 436 aaPredicted RBP11.88□□□□□ -0.51
TOM1-215ENST00000491987 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 FAAP24Q9BTP7 215 aa11.88□□□□□ -0.51
TOM1-215ENST00000491987 NCBP2LA6PVI3 153 aaKnown RBP11.87□□□□□ -0.51
TOM1-215ENST00000491987 ZNF736B4DX44 427 aaPredicted RBP11.87□□□□□ -0.51
TOM1-215ENST00000491987 PRB2P02812 416 aaPredicted RBP11.87□□□□□ -0.51
TOM1-215ENST00000491987 MAP2K4P45985 399 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 ZNF137PP52743 207 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 MLLT11Q13015 90 aaPredicted RBP11.87□□□□□ -0.51
TOM1-215ENST00000491987 TPBGQ13641 420 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 TMEM91Q6ZNR0 172 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 PRSS48Q7RTY5 328 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 SLC35E3Q7Z769 313 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 Q8N6K4 173 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 OR6M1Q8NGM8 313 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 KCNG3Q8TAE7 436 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
TOM1-215ENST00000491987 CNBD2Q96M20 576 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 TM2D1Q9BX74 207 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 ISYNA1Q9NPH2 558 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 OR2S2Q9NQN1 319 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 LINC00527Q9UJ94 153 aa11.87□□□□□ -0.51
TOM1-215ENST00000491987 PRKDCP78527 4128 aaKnown RBP11.87□□□□□ -0.51
TOM1-215ENST00000491987 A0A0A6YYD4 124 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 TXNL1O43396 289 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 BPNT1O95861 308 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 IGHG2P01859 326 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 PF4P02776 101 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 CD37P11049 281 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 CD33P20138 364 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 CD1BP29016 333 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 PPP1CCP36873 323 aaKnown RBP11.86□□□□□ -0.51
TOM1-215ENST00000491987 HSPA13P48723 471 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 QRFPP83859 136 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 P2RY14Q15391 338 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 MORN2Q502X0 79 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 ZNF554Q86TJ5 538 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 CHPT1Q8WUD6 406 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 GFI1Q99684 422 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 MGLLQ99685 303 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 PLGRKTQ9HBL7 147 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 JPT1Q9UK76 154 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 AK6Q9Y3D8 172 aaKnown RBP11.86□□□□□ -0.51
TOM1-215ENST00000491987 PLXNB1O43157 2135 aa11.86□□□□□ -0.51
TOM1-215ENST00000491987 ARL6IP5O75915 188 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 MOSP00540 346 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 CPEP16870 476 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 PSMA1P25786 263 aaKnown RBP11.85□□□□□ -0.51
TOM1-215ENST00000491987 BLVRBP30043 206 aaPredicted RBP11.85□□□□□ -0.51
TOM1-215ENST00000491987 HTD2P86397 168 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 TRAM1Q15629 374 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 FOXRED2Q8IWF2 684 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 Q8N9W7 124 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 SETD6Q8TBK2 473 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 ABHD14AQ9BUJ0 271 aa11.85□□□□□ -0.51
TOM1-215ENST00000491987 CHMP1AQ9HD42 196 aaPredicted RBP11.85□□□□□ -0.51
TOM1-215ENST00000491987 LIN7CQ9NUP9 197 aaKnown RBP11.85□□□□□ -0.51
TOM1-215ENST00000491987 LINC01548A6NM66 108 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 SLC17A2O00624 439 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 LANCL1O43813 399 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 IGLL1P15814 213 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 ARSBP15848 533 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
TOM1-215ENST00000491987 GPR12P47775 334 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 FABP5Q01469 135 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 HMGN3Q15651 99 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 STEAP3Q658P3 488 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 Q6ZPA2 131 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 PHF21AQ96BD5 680 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 GALMQ96C23 342 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 S1PR3Q99500 378 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 URM1Q9BTM9 101 aaKnown RBP11.84□□□□□ -0.51
TOM1-215ENST00000491987 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 ABCG5Q9H222 651 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 PLEKHJ1Q9NW61 149 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 ABRACLQ9P1F3 81 aa11.84□□□□□ -0.51
TOM1-215ENST00000491987 SOCS1O15524 211 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms