RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C6orf183Q5T699 404 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 TEX38Q6PEX7 206 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 MOB3BQ86TA1 216 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 LRRTM1Q86UE6 522 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 ZNF695Q8IW36 515 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 FOXRED2Q8IWF2 684 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 CCDC107Q8WV48 283 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 THRSPQ92748 146 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 TFAP2CQ92754 450 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 RAX2Q96IS3 184 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 CHCHD6Q9BRQ6 235 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 GON7Q9BXV9 100 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 GPR61Q9BZJ8 451 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 DCLRE1BQ9H816 532 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 RAB9BQ9NP90 201 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 CHCHD3Q9NX63 227 aaKnown RBP6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 ETAA1Q9NY74 926 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 PEX16Q9Y5Y5 336 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 IGHV3-43A0A0B4J1X8 118 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 IGHV3-72A0A0B4J1Y9 119 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 A0A1W2PPK0 400 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 CCL24O00175 119 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 SPINT2O43291 252 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 RRP9O43818 475 aaKnown RBP6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 YPEL1O60688 119 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 PDCD6O75340 191 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 MPIG6BO95866 241 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 MAS1P04201 325 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 ELANEP08246 267 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 IGHV3-43DP0DP04 118 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 MAPK3P27361 379 aaPredicted RBP6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 PSMB8P28062 276 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 PPIFP30405 207 aaKnown RBP6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 LSAMPQ13449 338 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 GPR50Q13585 617 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 FHL3Q13643 280 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 C8orf86Q6ZUL3 223 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 C8orf59Q8N0T1 100 aaPredicted RBP6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 JAGN1Q8N5M9 183 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 OR4K15Q8NH41 348 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 OR1L1Q8NH94 360 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 UBALD1Q8TB05 177 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 MRPL30Q8TCC3 161 aaKnown RBP6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 PHYHIPQ92561 330 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 CYYR1Q96J86 154 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 YPEL2Q96QA6 119 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 HSPB9Q9BQS6 159 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 SELENOIQ9C0D9 397 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 BANF2Q9H503 90 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 TAF9BQ9HBM6 251 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 LINC00527Q9UJ94 153 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 TRAPPC2LQ9UL33 140 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 LSM2Q9Y333 95 aaKnown RBP6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 LRRC42Q9Y546 428 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 NBEAL2Q6ZNJ1 2754 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 DNAH9Q9NYC9 4486 aa6.56□□□□□ -1.36
SMARCB1-207ENST00000491967 NCBP2LA6PVI3 153 aaKnown RBP6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 NAPSAO96009 420 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 RPLP1P05386 114 aaKnown RBP6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 UBBP0CG47 229 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 VSIG8P0DPA2 414 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 CHATP28329 748 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 RUNX1Q01196 453 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 IRF3Q14653 427 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 RCN1Q15293 331 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 HMGN3Q15651 99 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 C19orf54Q5BKX5 351 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 AWAT2Q6E213 333 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 ZNF880Q6PDB4 577 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 ZNF833PQ6ZTB9 187 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 AHSA2Q719I0 299 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 FAM89BQ8N5H3 189 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 MS4A15Q8N5U1 240 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 KLHL30-AS1Q8NEE0 82 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 NPBQ8NG41 125 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 NEK7Q8TDX7 302 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 RITA1Q96K30 269 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 B9D2Q9BPU9 175 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 ZNF251Q9BRH9 671 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 TM2D1Q9BX74 207 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 OR2S2Q9NQN1 319 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 JPT1Q9UK76 154 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 STAB2Q8WWQ8 2551 aa6.55□□□□□ -1.36
SMARCB1-207ENST00000491967 TRBV6-6A0A0A6YYG2 114 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 UBE2QL1A1L167 161 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 ITGB1BP1O14713 200 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 SLC22A1O15245 554 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 CRTAPO75718 401 aaPredicted RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 HLA-DRB1P01911 266 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 CDK1P06493 297 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 HTR2CP28335 458 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 HOXD3P31249 432 aaPredicted RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 SOX6P35712 828 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 RPS27AP62979 156 aaKnown RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 UNC119Q13432 240 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 INSL4Q14641 139 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms