RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PDZD9Q8IXQ8 264 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 LINC01006Q8NI28 216 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 S100A16Q96FQ6 103 aaKnown RBP12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 HDHD3Q9BSH5 251 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 TAF9BQ9HBM6 251 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 DIABLOQ9NR28 239 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 COMMD3Q9UBI1 195 aa12.17□□□□□ -0.46
CDC42SE1-205ENST00000491825 SPINT2O43291 252 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 CD3GP09693 182 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 DTYMKP23919 212 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 COX7A1P24310 79 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 SAA4P35542 130 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 PROK1P58294 105 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 MRPS15P82914 257 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 PITPNAQ00169 270 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 SRSF7Q16629 238 aaKnown RBP eCLIP12.16□□□□□ -0.461e-5■■■□□ 19.1
CDC42SE1-205ENST00000491825 Q3ZCU0 254 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 Q6ZS49 121 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 PNKDQ8N490 385 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 CLEC7AQ9BXN2 247 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 SLIRPQ9GZT3 109 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 Q9N2K0 584 aa12.16□□□□□ -0.46
CDC42SE1-205ENST00000491825 A0A075B6Q4 140 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 HBZP02008 142 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 FCGR3AP08637 254 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 LOXL3P58215 753 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 HTD2P86397 168 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 BEND2Q8NDZ0 799 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 RFESDQ8TAC1 157 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 TBL2Q9Y4P3 447 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 RNF114Q9Y508 228 aa12.15□□□□□ -0.46
CDC42SE1-205ENST00000491825 NOTCH1P46531 2555 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 SDCBPO00560 298 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 HPGDSO60760 199 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 DIRAS3O95661 229 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 HLA-DRB3P79483 266 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 ARFRP1Q13795 201 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 BAIAP2L2Q6UXY1 529 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 Q6ZSV7 163 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 GALMQ96C23 342 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 NXF2Q9GZY0 626 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 AUNIPQ9H7T9 357 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 ZNF286AQ9HBT8 521 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 JPT1Q9UK76 154 aa12.14□□□□□ -0.47
CDC42SE1-205ENST00000491825 MEIOCA2RUB1 952 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 DPPA5A6NC42 116 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 TPPPO94811 219 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 ARG1P05089 322 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 FBP1P09467 338 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 ELK1P19419 428 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 NFYBP25208 207 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 TALDO1P37837 337 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 MNDAP41218 407 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 KIR2DS4P43632 304 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 TAS2R20P59543 309 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 GNG2P59768 71 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 KIR2DS1Q14954 304 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 OR4P4Q8NGL7 312 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 CREB3L1Q96BA8 519 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 DGCR14Q96DF8 476 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 AJUBAQ96IF1 538 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 MMP27Q9H306 513 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 DPAGT1Q9H3H5 408 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 C16orf95Q9H693 158 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 VPREB3Q9UKI3 123 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 ELF5Q9UKW6 265 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 MINOS1-NBL1R4GNA1 71 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 TGP01266 2768 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 WNK1Q9H4A3 2382 aa12.13□□□□□ -0.47
CDC42SE1-205ENST00000491825 TRDCB7Z8K6 153 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 M0QZ24 198 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 TIMM23O14925 209 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 SSX5O60225 188 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 UTF1Q5T230 341 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 PRR18Q8N4B5 295 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 LINC00311Q8N616 119 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 OR4A4PQ8NGN8 299 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms