RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 VAX1Q5SQQ9 334 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 SIGIRRQ6IA17 410 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 AHSA2Q719I0 299 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 LYPD6Q86Y78 171 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CDH26Q8IXH8 852 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 FAM71E2Q8N5Q1 922 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 NKAIN3Q8N8D7 197 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 OR8H1Q8NGG4 311 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CT45A3Q8NHU0 189 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 TFAP2CQ92754 450 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 RAX2Q96IS3 184 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 GON7Q9BXV9 100 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CNOT2Q9NZN8 540 aaKnown RBP10.71□□□□□ -0.69
COL6A3-211ENST00000491233 UBE2QL1A1L167 161 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 CCL24O00175 119 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 CA11O75493 328 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 GNAO1P09471 354 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 SOX6P35712 828 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 F2RL1P55085 397 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 WNT4P56705 351 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 CFHR3Q02985 330 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 CD69Q07108 199 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 LSAMPQ13449 338 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 FOXE3Q13461 319 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 RCN1Q15293 331 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 LAIR2Q6ISS4 152 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 C8orf59Q8N0T1 100 aaPredicted RBP10.7□□□□□ -0.7
COL6A3-211ENST00000491233 FAM46BQ96A09 425 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 DCLRE1BQ9H816 532 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 TAF9BQ9HBM6 251 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 OR2S2Q9NQN1 319 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 MBNL3Q9NUK0 354 aaKnown RBP10.7□□□□□ -0.7
COL6A3-211ENST00000491233 PSORS1C1Q9UIG5 152 aa10.7□□□□□ -0.7
COL6A3-211ENST00000491233 DNAH9Q9NYC9 4486 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 LANCL1O43813 399 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 PDCD6O75340 191 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 ELANEP08246 267 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 SLC2A2P11168 524 aaPredicted RBP10.69□□□□□ -0.7
COL6A3-211ENST00000491233 FUT3P21217 361 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 VDAC1P21796 283 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 MYF6P23409 242 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 MMDQ15546 238 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 NKAPLQ5M9Q1 402 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 C5orf24Q7Z6I8 188 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 OR52L2PQ8NGH6 319 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 OR8U1Q8NH10 309 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 MRPL30Q8TCC3 161 aaKnown RBP10.69□□□□□ -0.7
COL6A3-211ENST00000491233 THRSPQ92748 146 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 UQCC2Q9BRT2 126 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 ABHD14AQ9BUJ0 271 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 KCNIP1Q9NZI2 227 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 ZNF107Q9UII5 783 aaPredicted RBP10.69□□□□□ -0.7
COL6A3-211ENST00000491233 JPT1Q9UK76 154 aa10.69□□□□□ -0.7
COL6A3-211ENST00000491233 CD1AP06126 327 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 GLAP06280 429 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 MAPK3P27361 379 aaPredicted RBP10.68□□□□□ -0.7
COL6A3-211ENST00000491233 PPP1CCP36873 323 aaKnown RBP10.68□□□□□ -0.7
COL6A3-211ENST00000491233 CDX1P47902 265 aaPredicted RBP10.68□□□□□ -0.7
COL6A3-211ENST00000491233 LUMP51884 338 aaPredicted RBP10.68□□□□□ -0.7
COL6A3-211ENST00000491233 DGCR2P98153 550 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 INSL4Q14641 139 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 MORN2Q502X0 79 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 STEAP3Q658P3 488 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 UNQ9370/PRO34162Q6UXP9 181 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 BPIFB6Q8NFQ5 453 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 FBLIM1Q8WUP2 373 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 B9D2Q9BPU9 175 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 MRPL20Q9BYC9 149 aaKnown RBP10.68□□□□□ -0.7
COL6A3-211ENST00000491233 CST11Q9H112 138 aa10.68□□□□□ -0.7
COL6A3-211ENST00000491233 IGHG4P01861 327 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 GP2P55259 537 aaKnown RBP10.67□□□□□ -0.7
COL6A3-211ENST00000491233 DCTN2Q13561 401 aaKnown RBP10.67□□□□□ -0.7
COL6A3-211ENST00000491233 KIR2DS1Q14954 304 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 C6orf141Q5SZD1 244 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 FAM27D1Q5T7N8 215 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 OR10K2Q6IF99 312 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 ZNF554Q86TJ5 538 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 ODF3L1Q8IXM7 274 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 NANOGP1Q8N7R0 232 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 OR5M8Q8NGP6 311 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 KCTD7Q96MP8 289 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 NABP2Q9BQ15 211 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 SULT4A1Q9BR01 284 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 PLCXD1Q9NUJ7 323 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 GHRLQ9UBU3 117 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 ZNF580Q9UK33 172 aa10.67□□□□□ -0.7
COL6A3-211ENST00000491233 IGF1P05019 195 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 OR5H8P0DN80 308 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 CNTFRP26992 372 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 PSMB8P28062 276 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 CHATP28329 748 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 ACTBP60709 375 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 GABPB1Q06547 395 aaPredicted RBP10.66□□□□□ -0.7
COL6A3-211ENST00000491233 HMGN3Q15651 99 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 RBM48Q5RL73 367 aaKnown RBP10.66□□□□□ -0.7
COL6A3-211ENST00000491233 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 OGFRL1Q5TC84 451 aaPredicted RBP10.66□□□□□ -0.7
COL6A3-211ENST00000491233 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 KCNK15Q9H427 330 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms