RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ZNF98A6NK75 572 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 ST8SIA3O43173 380 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 PLAUP00749 431 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 SNCAP37840 140 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 PPT1P50897 306 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 RBM11P57052 281 aaKnown RBP19.22■□□□□ 0.67
USF3-203ENST00000491165 NKX6-1P78426 367 aaPredicted RBP19.22■□□□□ 0.67
USF3-203ENST00000491165 SSX8Q7RTT4 187 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 OR52M1Q8NGK5 317 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 OR11L1Q8NGX0 322 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 SLC25A40Q8TBP6 338 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 ZNF816-ZNF321PA0A0X1KG74 233 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 COLCA2A8K830 154 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 PHF1O43189 567 aaPredicted RBP19.22■□□□□ 0.67
USF3-203ENST00000491165 PAX6P26367 422 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 ZNF616Q08AN1 781 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 PIGCQ92535 297 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 NEUROG1Q92886 237 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 RSRP1Q9BUV0 290 aa19.22■□□□□ 0.67
USF3-203ENST00000491165 REPIN1Q9BWE0 567 aaKnown RBP19.22■□□□□ 0.67
USF3-203ENST00000491165 A1L4Q6 167 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 ZNF442Q9H7R0 627 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 TMED3Q9Y3Q3 217 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 PQLC2LA1A4F0 135 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 LILRA1O75019 489 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 FUT3P21217 361 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 AADACP22760 399 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 MPV17P39210 176 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 CAMLGP49069 296 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 C15orf54Q8N8G6 183 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 ESRP2Q9H6T0 727 aaKnown RBP19.21■□□□□ 0.67
USF3-203ENST00000491165 NGBQ9NPG2 151 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 ZDHHC8Q9ULC8 765 aa19.21■□□□□ 0.67
USF3-203ENST00000491165 SHISA9B4DS77 424 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 PRSS44E7EML9 344 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 FOLR2P14207 255 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 PMELP40967 661 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 RAB5CP51148 216 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 PDCD1Q15116 288 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 ALKBH6Q3KRA9 238 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 AKIRIN2Q53H80 203 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 VHLLQ6RSH7 139 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 KLF14Q8TD94 323 aaPredicted RBP19.2■□□□□ 0.66
USF3-203ENST00000491165 C2CD4CQ8TF44 421 aa19.2■□□□□ 0.66
USF3-203ENST00000491165 RCL1Q9Y2P8 373 aaKnown RBP19.2■□□□□ 0.66
USF3-203ENST00000491165 GUK1Q16774 197 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 Q6ZPA2 131 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 TMEM171Q8WVE6 324 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 STRAPQ9Y3F4 350 aaKnown RBP19.19■□□□□ 0.66
USF3-203ENST00000491165 DOPEY2Q9Y3R5 2298 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 OR7C1O76099 320 aaPredicted RBP19.19■□□□□ 0.66
USF3-203ENST00000491165 PPYP01298 95 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 GLAP06280 429 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 KCNJ3P48549 501 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 LRP11Q86VZ4 500 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 ZFP82Q8N141 532 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 SLC35G3Q8N808 338 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 ZNF611Q8N823 705 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 C19orf12Q9NSK7 152 aa19.19■□□□□ 0.66
USF3-203ENST00000491165 J3QW42 95 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 PRH1P02810 166 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 GNMTQ14749 295 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 MEX3BQ6ZN04 569 aaKnown RBP19.18■□□□□ 0.66
USF3-203ENST00000491165 ETV3LQ6ZN32 361 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 CALHM1Q8IU99 346 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 OR4D5Q8NGN0 318 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 HPSE2Q8WWQ2 592 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 C14orf79Q96F83 325 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 TP53RKQ96S44 253 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 C12orf57Q99622 126 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 BCL2L14Q9BZR8 327 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 COA4Q9NYJ1 87 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 FASNP49327 2511 aaKnown RBP19.18■□□□□ 0.66
USF3-203ENST00000491165 A0A1W2PPR1 153 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 FABP6P51161 128 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 SRPXP78539 464 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 NHLH2Q02577 135 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 PSG7Q13046 419 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 OR2T2Q6IF00 324 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 OR56B2PQ8NGI1 322 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 LILRB1Q8NHL6 650 aaPredicted RBP19.18■□□□□ 0.66
USF3-203ENST00000491165 POM121Q96HA1 1249 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 CLCC1Q96S66 551 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 SCRT1Q9BWW7 348 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 EIF5A2Q9GZV4 153 aaKnown RBP19.18■□□□□ 0.66
USF3-203ENST00000491165 SH3BGRL3Q9H299 93 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 RPS10P5Q9NQ39 176 aa19.18■□□□□ 0.66
USF3-203ENST00000491165 C3orf85A0A1B0GTC6 90 aa19.17■□□□□ 0.66
USF3-203ENST00000491165 FHITP49789 147 aa19.17■□□□□ 0.66
USF3-203ENST00000491165 RAB5BP61020 215 aa19.17■□□□□ 0.66
USF3-203ENST00000491165 SLC25A26Q70HW3 274 aa19.17■□□□□ 0.66
USF3-203ENST00000491165 MRPL21Q7Z2W9 205 aaKnown RBP19.17■□□□□ 0.66
USF3-203ENST00000491165 FAM185AQ8N0U4 392 aa19.17■□□□□ 0.66
USF3-203ENST00000491165 FBN2P35556 2912 aa19.17■□□□□ 0.66
USF3-203ENST00000491165 MPPED1O15442 326 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 IFNA4P05014 189 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 GLRXP35754 106 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 HSD17B11Q8NBQ5 300 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 EGLN1Q9GZT9 426 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 CENPEQ02224 2701 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms