RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZNF565Q8N9K5 539 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 GALMQ96C23 342 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 PDCD10Q9BUL8 212 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 CLEC4MQ9H2X3 399 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-219ENST00000491128 OR2S2Q9NQN1 319 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 RAI1Q7Z5J4 1906 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-219ENST00000491128 A0A1W2PPE3 182 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 C5orf51A6NDU8 294 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 HMGN3Q15651 99 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 H1FOOQ8IZA3 346 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-219ENST00000491128 SPICQ8N5J4 248 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 SCGB3A2Q96PL1 93 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 MYOZ1Q9NP98 299 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-219ENST00000491128 KCNS2Q9ULS6 477 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 PCDHB10Q9UN67 800 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 H7C1Q1 480 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 MGST3O14880 152 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 PHF1O43189 567 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-219ENST00000491128 ADAM20O43506 726 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 TUSC2O75896 110 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 C1QBP02746 253 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 DNASE1P24855 282 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 SSTR2P30874 369 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 GZMKP49863 264 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-219ENST00000491128 ZNF788Q6ZQV5 615 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 SGPP2Q8IWX5 399 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 OR51H1Q8NH63 302 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 ZFAND1Q8TCF1 268 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 ERGIC1Q969X5 290 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 OPN4Q9UHM6 478 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 OR2W1Q9Y3N9 320 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 CRYM-AS1A6NIL9 109 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 IFNA2P01563 188 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 HEXAP06865 529 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 TAS2R31P59538 309 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 SURF2Q15527 256 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-219ENST00000491128 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMPD4-219ENST00000491128 HFEQ30201 348 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 TBC1D26Q86UD7 250 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 TMEM246Q9BRR3 403 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 CABLES2Q9BTV7 478 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 RSRP1Q9BUV0 290 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 ZNF665Q9H7R5 613 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 METTL8Q9H825 291 aaKnown RBP11.56□□□□□ -0.56
SMPD4-219ENST00000491128 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
SMPD4-219ENST00000491128 LGALS8O00214 317 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 MMP23AO75900 390 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 KCNJ3P48549 501 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 P2RX3P56373 397 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMPD4-219ENST00000491128 TEX36Q5VZQ5 186 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 SLC38A6Q8IZM9 456 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 ZNF561Q8N587 486 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
SMPD4-219ENST00000491128 SDSLQ96GA7 329 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 ABHD14BQ96IU4 210 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 OR10C1Q96KK4 312 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 HSPB11Q9Y547 144 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 POLQO75417 2590 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 C15orf65H3BRN8 121 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 TSC22D2O75157 780 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 IGLV2-14P01704 120 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 DANCRP0C864 163 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 MUC1P15941 1255 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-219ENST00000491128 ZNF16P17020 682 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-219ENST00000491128 AGAP20933 346 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 DLX1P56177 255 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 LAMTOR1Q6IAA8 161 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 FAHD2BQ6P2I3 314 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-219ENST00000491128 BTNL3Q6UXE8 466 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 TCF23Q7RTU1 214 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 OR5M8Q8NGP6 311 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 FAHD2AQ96GK7 314 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 NAA60Q9H7X0 242 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 GSKIPQ9P0R6 139 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 ZNRD1Q9P1U0 126 aa11.55□□□□□ -0.56
SMPD4-219ENST00000491128 TRAV38-1A0A0B4J264 116 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 CTXN2P0C2S0 81 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 OR2B11Q5JQS5 317 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 MOB1BQ7L9L4 216 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 LYZL2Q7Z4W2 148 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 C1orf87Q8N0U7 546 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 C19orf12Q9NSK7 152 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 SLC25A10Q9UBX3 287 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-219ENST00000491128 SIGLEC5O15389 551 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 MPPED1O15442 326 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 OR2A4O95047 310 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 NFYBP25208 207 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 FOXRED2Q8IWF2 684 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 GLYATL2Q8WU03 294 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
SMPD4-219ENST00000491128 FXYD6-FXYD2A0A087WZ82 144 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 DBX1A6NMT0 343 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 RPA2P15927 270 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 CCL3L1P16619 93 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms