RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ZNF665Q9H7R5 613 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 PLEKHF2Q9H8W4 249 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 SAP30LQ9HAJ7 183 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 GCM1Q9NP62 436 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 PIPOXQ9P0Z9 390 aa8.6□□□□□ -1.03
HDAC3-210ENST00000490808 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-210ENST00000490808 CELSR1Q9NYQ6 3014 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 FXYD6-FXYD2A0A087WZ82 144 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 C3orf85A0A1B0GTC6 90 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 SHISA9B4DS77 424 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 SMLR1H3BR10 107 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 MPPED1O15442 326 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 NDUFA2O43678 99 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 PSPNO60542 156 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 SIX6O95475 246 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 RCC1P18754 421 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-210ENST00000490808 PSMB6P28072 239 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 CEACAM6P40199 344 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 SNRPD2P62316 118 aaKnown RBP8.59□□□□□ -1.03
HDAC3-210ENST00000490808 SNTB1Q13884 538 aaKnown RBP8.59□□□□□ -1.03
HDAC3-210ENST00000490808 MSMO1Q15800 293 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 MSMPQ1L6U9 139 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 C11orf87Q6NUJ2 197 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 TMEM65Q6PI78 240 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF546Q86UE3 836 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 LRTM2Q8N967 370 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 INO80EQ8NBZ0 244 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-210ENST00000490808 EDARADDQ8WWZ3 215 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 MBD6Q96DN6 1003 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 CISD1Q9NZ45 108 aaKnown RBP8.59□□□□□ -1.03
HDAC3-210ENST00000490808 KIF25Q9UIL4 384 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 TMED3Q9Y3Q3 217 aa8.59□□□□□ -1.03
HDAC3-210ENST00000490808 CHD3Q12873 2000 aaKnown RBP8.59□□□□□ -1.03
HDAC3-210ENST00000490808 K7N7A8 449 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 PHF1O43189 567 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-210ENST00000490808 SIAH2O43255 324 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 ATG12O94817 140 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 OR2F2O95006 317 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 IFNA7P01567 189 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 HEXAP06865 529 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 RPA2P15927 270 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 OR3A1P47881 315 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 SUPT4H1P63272 117 aaKnown RBP8.58□□□□□ -1.04
HDAC3-210ENST00000490808 CCL8P80075 99 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 HTD2P86397 168 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 AESQ08117 197 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 OR2F1Q13607 317 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 TMEM187Q14656 261 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 LY6G6FQ5SQ64 297 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 TEX36Q5VZQ5 186 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 ZNF695Q8IW36 515 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 TCTEX1D1Q8N7M0 179 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 PPP1R1CQ8WVI7 109 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 IL22RA2Q969J5 263 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 SDSLQ96GA7 329 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 TOLLIPQ9H0E2 274 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 BEX4Q9NWD9 120 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-210ENST00000490808 LPAR3Q9UBY5 353 aa8.58□□□□□ -1.04
HDAC3-210ENST00000490808 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
HDAC3-210ENST00000490808 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-210ENST00000490808 PPIAL4EA0A075B759 164 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 TRGV10A0A0A0MS01 117 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 E7EQL1 145 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 PPIAL4DF5H284 164 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 LGALS8O00214 317 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 TSC22D2O75157 780 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 HOXB5P09067 269 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 WNT2P09544 360 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 OR5AC1P0C628 307 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 PPIAL4FP0DN26 164 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 PAX1P15863 534 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 RPS2P15880 293 aaKnown RBP8.57□□□□□ -1.04
HDAC3-210ENST00000490808 GNRHRP30968 328 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 S100A11P31949 105 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 CEBPDP49716 269 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-210ENST00000490808 CATR1Q13166 79 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 HERPUD1Q15011 391 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 C2orf68Q2NKX9 166 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 ANKRD55Q3KP44 614 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 LGALSLQ3ZCW2 172 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-210ENST00000490808 DCAF12L2Q5VW00 463 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 TBC1D26Q86UD7 250 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 DTX2Q86UW9 622 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 LRRC75A-AS1Q8N1F1 130 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 CD177Q8N6Q3 437 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 BVESQ8NE79 360 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 ANGPTL6Q8NI99 470 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 ARL11Q969Q4 196 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 RAB39BQ96DA2 213 aa8.57□□□□□ -1.04
HDAC3-210ENST00000490808 MFFQ9GZY8 342 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms