RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 F8VWA3 439 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 HSD17B6O14756 317 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 OGG1O15527 345 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 SPINT2O43291 252 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ORC5O43913 435 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 CA11O75493 328 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 HTR3BO95264 441 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 IGHG2P01859 326 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 CD1AP06126 327 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ELANEP08246 267 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A15PP0C7V4 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A13PP0C7W8 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A14PP0C7W9 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A24PP0C7X0 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 GTF2F2P13984 249 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 VDAC1P21796 283 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ZP1P60852 638 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 EWSR1Q01844 656 aaKnown RBP eCLIP5.6□□□□□ -1.51
COL9A1-209ENST00000489861 PNLIPRP3Q17RR3 467 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 Q499Y3 187 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 DDI2Q5TDH0 399 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF529Q6P280 563 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 Q6P435 159 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM65Q6PI78 240 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 CEMP1Q6PRD7 247 aaPredicted RBP5.6□□□□□ -1.51
COL9A1-209ENST00000489861 LINC00336Q6ZUF6 198 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 HAPLN4Q86UW8 402 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 SGPP2Q8IWX5 399 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 DRAM1Q8N682 238 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 NKAIN3Q8N8D7 197 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 C5orf56Q8N8D9 126 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 OR56B4Q8NH76 319 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 CNIH3Q8TBE1 160 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 DCUN1D4Q92564 292 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 SPACA5Q96QH8 159 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 NR1H4Q96RI1 486 aaPredicted RBP5.6□□□□□ -1.51
COL9A1-209ENST00000489861 SLC29A1Q99808 456 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 LINC00574Q9H8X3 128 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ISG20L2Q9H9L3 353 aaKnown RBP5.6□□□□□ -1.51
COL9A1-209ENST00000489861 AMBNQ9NP70 447 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF580Q9UK33 172 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ING4Q9UNL4 249 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ST3GAL6Q9Y274 331 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 ERGIC3Q9Y282 383 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 IGKV1-12A0A0C4DH73 117 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 MEX3AA1L020 520 aaKnown RBP5.59□□□□□ -1.51
COL9A1-209ENST00000489861 MAGEA13PA6NCF6 341 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 C12orf77C9JDV5 145 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 MCRIP1C9JLW8 97 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 NPIPB11E5RHQ5 1161 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 LY6LH3BQJ8 138 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 SDCBPO00560 298 aaPredicted RBP5.59□□□□□ -1.51
COL9A1-209ENST00000489861 GABRPO00591 440 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 HSPB6O14558 160 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 GPX5O75715 221 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 OR7C1O76099 320 aaPredicted RBP5.59□□□□□ -1.51
COL9A1-209ENST00000489861 RGS11O94810 467 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 IGKV1D-33P01593 117 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 IGKV1-33P01594 117 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 IGKV1D-12P01611 117 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 GLAP06280 429 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 LIMS3P0CW19 117 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 LIMS4P0CW20 117 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 CD1BP29016 333 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 CAPGP40121 348 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 GPR12P47775 334 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 SOX2P48431 317 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 RBM11P57052 281 aaKnown RBP5.59□□□□□ -1.51
COL9A1-209ENST00000489861 RBMY1FQ15415 496 aaKnown RBP5.59□□□□□ -1.51
COL9A1-209ENST00000489861 C17orf58Q2M2W7 97 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 STEAP3Q658P3 488 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 ASCL4Q6XD76 172 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 MOB3BQ86TA1 216 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF554Q86TJ5 538 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 STPG2Q8N412 459 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 MS4A15Q8N5U1 240 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 LINC00311Q8N616 119 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 OR10AC1Q8NH08 325 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 MRGPRDQ8TDS7 321 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 C4orf3Q8WVX3 66 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 COQ2Q96H96 371 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 DPCDQ9BVM2 203 aaPredicted RBP5.59□□□□□ -1.51
COL9A1-209ENST00000489861 CST11Q9H112 138 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 VCX3BQ9H321 246 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 ING3Q9NXR8 418 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 SCN3BQ9NY72 215 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 TAS2R4Q9NYW5 299 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 KCNIP1Q9NZI2 227 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 IL36RNQ9UBH0 155 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 KIF25Q9UIL4 384 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 LRRC42Q9Y546 428 aa5.59□□□□□ -1.51
COL9A1-209ENST00000489861 A0A1W2PPI3 338 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 AIPO00170 330 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 OVOL1O14753 267 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ARPC1BO15143 372 aaKnown RBP5.58□□□□□ -1.52
COL9A1-209ENST00000489861 WBP4O75554 376 aaKnown RBP5.58□□□□□ -1.52
COL9A1-209ENST00000489861 MMP23AO75900 390 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 MOSP00540 346 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 OR8U8P0C7N1 319 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms