RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 WNT2P09544 360 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 GDF1P27539 372 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC6A8P48029 635 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 NPBWR2P48146 333 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 RUNX1Q01196 453 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 RPL18Q07020 188 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 RTP5Q14D33 572 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 CBLN3Q6UW01 205 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 C19orf35Q6ZS72 473 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 ABHD12BQ7Z5M8 362 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 DEFB128Q7Z7B8 93 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 S100A7AQ86SG5 101 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 VASH2Q86V25 355 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 ODF3L1Q8IXM7 274 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 DEFB125Q8N687 156 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 FER1L6-AS1Q8NA97 138 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 OR4F17Q8NGA8 305 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 OR10W1Q8NGF6 305 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 OR51T1Q8NGJ9 327 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 OR2A1Q8NGT9 310 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 OR52N5Q8NH56 324 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 HOXB13Q92826 284 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 DAZLQ92904 295 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 OR4F4Q96R69 305 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 KLHDC3Q9BQ90 382 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 RSG1Q9BU20 258 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 PECRQ9BY49 303 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 S1PR5Q9H228 398 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 BANF2Q9H503 90 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 CHODLQ9H9P2 273 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 MMP25Q9NPA2 562 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 NRN1Q9NPD7 142 aa4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 PNO1Q9NRX1 252 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-206ENST00000489853 FANCMQ8IYD8 2048 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 TRAV9-2A0A087WT02 112 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 PRSS37A4D1T9 235 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 GRIFINA4D1Z8 144 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 IGLON5A6NGN9 336 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 C17orf112F2Z3M2 114 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC33A1O00400 549 aaPredicted RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 MLNRO43193 412 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 CD5LO43866 347 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 CST7O76096 145 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 ONECUT2O95948 504 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 IGLC1P0CG04 106 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 BLVRBP30043 206 aaPredicted RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 CD52P31358 61 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 MDH2P40926 338 aaKnown RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 MRPS34P82930 218 aaKnown RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 FMODQ06828 376 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 ZP4Q12836 540 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF726P1Q15940 193 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 HIST3H3Q16695 136 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 SPIN3Q5JUX0 258 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 C9orf135Q5VTT2 229 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 WBP2NLQ6ICG8 309 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 CPEB2Q7Z5Q1 589 aaKnown RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 OR4N5Q8IXE1 308 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 CCDC71LQ8N9Z2 235 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 CADM4Q8NFZ8 388 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 OR4P4Q8NGL7 312 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 PLPPR1Q8TBJ4 325 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 MRPL30Q8TCC3 161 aaKnown RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 LHX4Q969G2 390 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 SPSB1Q96BD6 273 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 ADAT3Q96EY9 351 aaPredicted RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 SIGLEC12Q96PQ1 595 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 ATP6V0BQ99437 205 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 NRTNQ99748 197 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 MOB1AQ9H8S9 216 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC39A9Q9NUM3 307 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 THAP10Q9P2Z0 257 aaPredicted RBP4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 POLR1DQ9Y2S0 133 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 OR1A2Q9Y585 309 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 OR51B2Q9Y5P1 312 aa4.09□□□□□ -1.76
SNRNP40-206ENST00000489853 TCF20Q9UGU0 1960 aaKnown RBP4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 PRUNE2Q8WUY3 3088 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 LOC102724200A0A096LPH7 203 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 IGLV1-36A0A0B4J1U3 117 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 LOC102725191A0A1B0GVB3 256 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 NKX2-6A6NCS4 301 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 SERINC4A6NH21 518 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 M0R296 226 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 SH2D1BO14796 132 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 SSSCA1O60232 199 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC16A7O60669 478 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 SAP30O75446 220 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 GOSR1O95249 250 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 MT-CO2P00403 227 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF20P17024 532 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 KITLGP21583 273 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 CTGFP29279 349 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 MC5RP33032 325 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 OR1D2P34982 312 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 CCR2P41597 374 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 PSG9Q00887 426 aa4.08□□□□□ -1.76
SNRNP40-206ENST00000489853 MGAT2Q10469 447 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms