RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 K7EM74 188 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 TIMM8AO60220 97 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-208ENST00000489611 TNFSF13O75888 250 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 H2AFB1P0C5Y9 115 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 CECR9P0C854 216 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 MPV17P39210 176 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 CXorf66Q5JRM2 361 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-208ENST00000489611 DPPA3Q6W0C5 159 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 NDRG3Q9UGV2 375 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 RNF115Q9Y4L5 304 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 IGSF23A1L1A6 192 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 FAM90A26D6RGX4 464 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 WISP2O76076 250 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 CGAP01215 116 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 TAS2R30P59541 319 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
COL9A1-208ENST00000489611 ZNF616Q08AN1 781 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 BHLHA15Q7RTS1 189 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-208ENST00000489611 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 RNASE11Q8TAA1 199 aaKnown RBP12.62□□□□□ -0.39
COL9A1-208ENST00000489611 COA4Q9NYJ1 87 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 OR1A1Q9P1Q5 309 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 DKK4Q9UBT3 224 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 TINAGQ9UJW2 476 aa12.62□□□□□ -0.39
COL9A1-208ENST00000489611 TOR1AO14656 332 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 MLNRO43193 412 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 TNFSF12O43508 249 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 CHST1O43916 411 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 APC2O95996 2303 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 CEACAM6P40199 344 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 MIDNQ504T8 468 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 ACP7Q6ZNF0 438 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 CXorf67Q86X51 503 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-208ENST00000489611 ZNF645Q8N7E2 425 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 HSD17B11Q8NBQ5 300 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 PLA2G2EQ9NZK7 142 aa12.61□□□□□ -0.39
COL9A1-208ENST00000489611 IGHV2OR16-5A0A0B4J2B6 119 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 IGLV2-14P01704 120 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 CRYABP02511 175 aaKnown RBP12.6□□□□□ -0.39
COL9A1-208ENST00000489611 PSG2P11465 335 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 CD80P33681 288 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 FAM122CQ6P4D5 195 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 OR5C1Q8NGR4 320 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 OR8U1Q8NH10 309 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 NINJ1Q92982 152 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-208ENST00000489611 LURAP1Q96LR2 239 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 TAAR6Q96RI8 345 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 ATP5SQ99766 215 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 ARID1AO14497 2285 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 FAM74A7A6NL05 159 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 FAM157AC9JC47 383 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 K7N7A8 449 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 SULT1A1P50225 295 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 FAM74A3Q4VXF1 159 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 CLEC9AQ6UXN8 241 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 WDR82Q6UXN9 313 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 C11orf53Q8IXP5 236 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 OR10Z1Q8NGY1 313 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 TMEM231Q9H6L2 316 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 KCNS2Q9ULS6 477 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 FAM96BQ9Y3D0 163 aa12.6□□□□□ -0.39
COL9A1-208ENST00000489611 DMXL2Q8TDJ6 3036 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 A6NLC8 198 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 H0YL77 283 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 K7ENP7 123 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 AGFG2O95081 481 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 IL2RGP31785 369 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 CFHR2P36980 270 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 PLA2G5P39877 138 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 ID4P47928 161 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 ARHGDIBP52566 201 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 RAB2AP61019 212 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 FOXF2Q12947 444 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 CATR1Q13166 79 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 IGFBP7Q16270 282 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 GUK1Q16774 197 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 Q6ZS92 163 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 C5orf24Q7Z6I8 188 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 OR2G3Q8NGZ4 309 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 MAGT1Q9H0U3 335 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 OR14J1Q9UGF5 321 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 LAMP3Q9UQV4 416 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
COL9A1-208ENST00000489611 SLC25A15Q9Y619 301 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms