RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PRSS29PA6NIE9 313 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 H0YJX3 145 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 SDCBPO00560 298 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-212ENST00000489378 NBR2O15453 112 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 XRCC3O43542 346 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 SYT7O43581 403 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 NDUFB8O95169 186 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 MAGEA2P43356 314 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 APOFQ13790 326 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 SLC35D3Q5M8T2 416 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 FAHD1Q6P587 224 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 SLC25A48Q6ZT89 311 aaKnown RBP6.86□□□□□ -1.31
SSBP1-212ENST00000489378 TCTEX1D1Q8N7M0 179 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 C8orf31Q8N9H6 132 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 OR5D18Q8NGL1 313 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 ASB17Q8WXJ9 295 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 DGCR6LQ9BY27 220 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 CST11Q9H112 138 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 GORASP2Q9H8Y8 452 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 CNOT2Q9NZN8 540 aaKnown RBP6.86□□□□□ -1.31
SSBP1-212ENST00000489378 ABCD2Q9UBJ2 740 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 ERGIC3Q9Y282 383 aa6.86□□□□□ -1.31
SSBP1-212ENST00000489378 CCDC182A6NF36 153 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 H3BN98 237 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 C15orf65H3BRN8 121 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 TXNL1O43396 289 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 SERPINA3P01011 423 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 TRGV3P03979 118 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF137PP52743 207 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 CX3CL1P78423 397 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 ACTBL2Q562R1 376 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 PYHIN1Q6K0P9 492 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF322Q6U7Q0 402 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-212ENST00000489378 LAX1Q8IWV1 398 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 OR2K2Q8NGT1 345 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 NIPSNAP1Q9BPW8 284 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF251Q9BRH9 671 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 FAM103A1Q9BTL3 118 aaKnown RBP6.85□□□□□ -1.31
SSBP1-212ENST00000489378 BARHL1Q9BZE3 327 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 GFOD1Q9NXC2 390 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 GAB2Q9UQC2 676 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
SSBP1-212ENST00000489378 PGPEP1LA6NFU8 196 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 FCN1O00602 326 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 RTL8CO15255 209 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 GMNNO75496 209 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 RPP14O95059 124 aaKnown RBP6.84□□□□□ -1.31
SSBP1-212ENST00000489378 TRBV12-3P01733 135 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ATF1P18846 271 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ALDH3A2P51648 485 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF134P52741 427 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 CXCR4P61073 352 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 PSME3P61289 254 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF45Q02386 682 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 GINS1Q14691 196 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-212ENST00000489378 CD200R1LQ6Q8B3 271 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 UNQ5815/PRO19632Q6UWF5 114 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 PPP1R27Q86WC6 154 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF439Q8NDP4 499 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 NPBQ8NG41 125 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 OR52M1Q8NGK5 317 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ABHD5Q8WTS1 349 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 ADAT3Q96EY9 351 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-212ENST00000489378 NR1H4Q96RI1 486 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-212ENST00000489378 TMEM14AQ9Y6G1 99 aa6.84□□□□□ -1.31
SSBP1-212ENST00000489378 NDUFAB1O14561 156 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 MITFO75030 526 aaPredicted RBP6.84□□□□□ -1.32
SSBP1-212ENST00000489378 NDUFA3O95167 84 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 APOL3O95236 402 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 COX4I1P13073 169 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 PRKACBP22694 351 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 BMI1P35226 326 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 DEFA5Q01523 94 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 PAX5Q02548 391 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 GUCA2BQ16661 112 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 MICAQ29983 383 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 CT45A1Q5HYN5 189 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 CD300LDQ6UXZ3 194 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 CT45A3Q8NHU0 189 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 CNIH3Q8TBE1 160 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 PP6455Q8WZ26 134 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 ARL11Q969Q4 196 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 RNF183Q96D59 192 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 RDH12Q96NR8 316 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 OPALINQ96PE5 141 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 FBXL15Q9H469 300 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 SLA2Q9H6Q3 261 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 NEK6Q9HC98 313 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 FAM118AQ9NWS6 357 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 NDE1Q9NXR1 346 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 ZNF581Q9P0T4 197 aa6.84□□□□□ -1.32
SSBP1-212ENST00000489378 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
SSBP1-212ENST00000489378 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-212ENST00000489378 C13orf42A0A1B0GVH6 325 aa6.83□□□□□ -1.32
SSBP1-212ENST00000489378 LOC107986453A0A1B0GWG9 222 aa6.83□□□□□ -1.32
SSBP1-212ENST00000489378 SPRY2O43597 315 aa6.83□□□□□ -1.32
SSBP1-212ENST00000489378 LANCL1O43813 399 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms