RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 RD3LP0DJH9 198 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 VDAC1P21796 283 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 COL8A2P25067 703 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 LTC4SQ16873 150 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 NCMAPQ5T1S8 102 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 CYB561D1Q8N8Q1 229 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 PLEKHF2Q9H8W4 249 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 RNF122Q9H9V4 155 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 UFSP2Q9NUQ7 469 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 STRAPQ9Y3F4 350 aaKnown RBP10.74□□□□□ -0.69
CLIC4-202ENST00000488683 INTS1Q8N201 2190 aaKnown RBP10.74□□□□□ -0.69
CLIC4-202ENST00000488683 CLEC18AA5D8T8 446 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 C21orf140B9A014 251 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 OR2H2O95918 312 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF14P17017 642 aaPredicted RBP10.73□□□□□ -0.69
CLIC4-202ENST00000488683 F2RP25116 425 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 LCN15Q6UWW0 184 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 BTNL3Q6UXE8 466 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 COMMD1Q8N668 190 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 CLEC18CQ8NCF0 446 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 MDS2Q8NDY4 140 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 OR51I2Q9H344 312 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 ABI3Q9P2A4 366 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 TRAPPC2LQ9UL33 140 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 RNF115Q9Y4L5 304 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 IGHV3-43A0A0B4J1X8 118 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SERPINE2P07093 398 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 IGHV3-43DP0DP04 118 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 MDKP21741 143 aaPredicted RBP10.73□□□□□ -0.69
CLIC4-202ENST00000488683 RAB5CP51148 216 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 GNG3P63215 75 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 FABP9Q0Z7S8 132 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SLC25A24Q6NUK1 477 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SCCPDHQ8NBX0 429 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 OR5D13Q8NGL4 314 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SPIN2AQ99865 258 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SPIN2BQ9BPZ2 258 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SLC35B3Q9H1N7 401 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 TINAGQ9UJW2 476 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 SVEP1Q4LDE5 3571 aa10.73□□□□□ -0.69
CLIC4-202ENST00000488683 RBFOX3A6NFN3 312 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 ZFP92A6NM28 416 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 DEFB108AA8MXU0 73 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 H0Y980 276 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 RAMP3O60896 148 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 CD55P08174 381 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 PTAFRP25105 342 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 MPV17P39210 176 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 HOXA1P49639 335 aaPredicted RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 ELLP55199 621 aaPredicted RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 ARG2P78540 354 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 HLA-DRB3P79483 266 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF266Q14584 549 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 RNPS1Q15287 305 aaKnown RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 SOHLH1Q5JUK2 328 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 HES3Q5TGS1 186 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 CMTM1Q8IZ96 169 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 H1FOOQ8IZA3 346 aaPredicted RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 GP6Q9HCN6 339 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 IGKV1-5P01602 117 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 RPS23P62266 143 aaKnown RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 IL24Q13007 206 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 SLC10A1Q14973 349 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 TESK1Q15569 626 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 EIF2S3LQ2VIR3 472 aaKnown RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 TMEM164Q5U3C3 297 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 Q6P435 159 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF880Q6PDB4 577 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF573Q86YE8 665 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 CNEP1R1Q8N9A8 125 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 BCL2L2Q92843 193 aaPredicted RBP10.72□□□□□ -0.69
CLIC4-202ENST00000488683 EGLN1Q9GZT9 426 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 GNG13Q9P2W3 67 aa10.72□□□□□ -0.69
CLIC4-202ENST00000488683 C1orf196B1AJZ1 125 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 PRSS44E7EML9 344 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 PSPNO60542 156 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 BMP5P22003 454 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 CEACAM6P40199 344 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF816Q0VGE8 651 aaPredicted RBP10.71□□□□□ -0.69
CLIC4-202ENST00000488683 BEND4Q6ZU67 534 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 C15orf54Q8N8G6 183 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 RFESDQ8TAC1 157 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 DCTN5Q9BTE1 182 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 OR5B21A6NL26 309 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 H3BQ15 152 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 S100A6P06703 90 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 CTXN2P0C2S0 81 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 SP9P0CG40 484 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 HMGN3Q15651 99 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 SPANXN5Q5MJ07 72 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 FBXW9Q5XUX1 488 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 OR8G2PQ6IF36 304 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 Q6ZR03 302 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 HAPLN4Q86UW8 402 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 OR1L1Q8NH94 360 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
CLIC4-202ENST00000488683 RAB39BQ96DA2 213 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms