RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RASL11BQ9BPW5 248 aa17.81■□□□□ 0.44
PTPN4-211ENST00000488279 TAF9BQ9HBM6 251 aa17.81■□□□□ 0.44
PTPN4-211ENST00000488279 OR2S2Q9NQN1 319 aa17.81■□□□□ 0.44
PTPN4-211ENST00000488279 KCNIP1Q9NZI2 227 aa17.81■□□□□ 0.44
PTPN4-211ENST00000488279 UBE2QL1A1L167 161 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 ZNF736B4DX44 427 aaPredicted RBP17.8■□□□□ 0.44
PTPN4-211ENST00000488279 MYCNOSP40205 109 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 KRTAP10-11P60412 298 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 GPR50Q13585 617 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 PNLIPRP3Q17RR3 467 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 C18orf65Q6ZTR6 163 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 TFAP2CQ92754 450 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 DPF1Q92782 380 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 FAM46BQ96A09 425 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 MCRIP2Q9BUT9 160 aaKnown RBP17.8■□□□□ 0.44
PTPN4-211ENST00000488279 CST11Q9H112 138 aa17.8■□□□□ 0.44
PTPN4-211ENST00000488279 K7EIL1 84 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 PDCD6O75340 191 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 EGFEM1PQ0D2K5 195 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 DEFB121Q5J5C9 76 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 SIGIRRQ6IA17 410 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 ZNF695Q8IW36 515 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 MS4A15Q8N5U1 240 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 VCXQ9H320 206 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 MBNL3Q9NUK0 354 aaKnown RBP17.79■□□□□ 0.44
PTPN4-211ENST00000488279 FKBP14Q9NWM8 211 aa17.79■□□□□ 0.44
PTPN4-211ENST00000488279 CASQ2O14958 399 aaPredicted RBP17.78■□□□□ 0.44
PTPN4-211ENST00000488279 HOXD3P31249 432 aaPredicted RBP17.78■□□□□ 0.44
PTPN4-211ENST00000488279 MORN2Q502X0 79 aa17.78■□□□□ 0.44
PTPN4-211ENST00000488279 ACSM3Q53FZ2 586 aa17.78■□□□□ 0.44
PTPN4-211ENST00000488279 ZNF554Q86TJ5 538 aa17.78■□□□□ 0.44
PTPN4-211ENST00000488279 MND1Q9BWT6 205 aa17.78■□□□□ 0.44
PTPN4-211ENST00000488279 H0YHG0 523 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 LANCL1O43813 399 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 RRP9O43818 475 aaKnown RBP17.77■□□□□ 0.44
PTPN4-211ENST00000488279 UBBP0CG47 229 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 SOX6P35712 828 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 F2RL1P55085 397 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 RNLSQ5VYX0 342 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 UNQ9370/PRO34162Q6UXP9 181 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 P2RX4Q99571 388 aa17.77■□□□□ 0.44
PTPN4-211ENST00000488279 WI2-2373I1.2A0A1W2PRP0 233 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 PTGES3LE9PB15 166 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 CDK1P06493 297 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 GABPB1Q06547 395 aaPredicted RBP17.76■□□□□ 0.43
PTPN4-211ENST00000488279 INSL4Q14641 139 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 CXorf66Q5JRM2 361 aaPredicted RBP17.76■□□□□ 0.43
PTPN4-211ENST00000488279 NKAPLQ5M9Q1 402 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 GLT8D1Q68CQ7 371 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 FAM71E2Q8N5Q1 922 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 OR52L2PQ8NGH6 319 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 MRPL30Q8TCC3 161 aaKnown RBP17.76■□□□□ 0.43
PTPN4-211ENST00000488279 NEDD4LQ96PU5 975 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 DCLRE1BQ9H816 532 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 JPT1Q9UK76 154 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 LRRC42Q9Y546 428 aa17.76■□□□□ 0.43
PTPN4-211ENST00000488279 RPLP1P05386 114 aaKnown RBP17.75■□□□□ 0.43
PTPN4-211ENST00000488279 HTD2P86397 168 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 LSAMPQ13449 338 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 FOXE3Q13461 319 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 PHYHIPQ92561 330 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 GALMQ96C23 342 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 ABHD14AQ9BUJ0 271 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 TMED9Q9BVK6 235 aa17.75■□□□□ 0.43
PTPN4-211ENST00000488279 CCL24O00175 119 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 RGS11O94810 467 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 ELANEP08246 267 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 VDAC1P21796 283 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 GP2P55259 537 aaKnown RBP17.74■□□□□ 0.43
PTPN4-211ENST00000488279 GNMTQ14749 295 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 FAM27D1Q5T7N8 215 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 LRRTM1Q86UE6 522 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 RBMXL1Q96E39 390 aaKnown RBP17.74■□□□□ 0.43
PTPN4-211ENST00000488279 RAX2Q96IS3 184 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 CYYR1Q96J86 154 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 HSPB9Q9BQS6 159 aa17.74■□□□□ 0.43
PTPN4-211ENST00000488279 ZMAT5Q9UDW3 170 aaKnown RBP17.74■□□□□ 0.43
PTPN4-211ENST00000488279 YPEL1O60688 119 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 VSIG8P0DPA2 414 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 SRMP19623 302 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 PPP1CCP36873 323 aaKnown RBP17.73■□□□□ 0.43
PTPN4-211ENST00000488279 CDX1P47902 265 aaPredicted RBP17.73■□□□□ 0.43
PTPN4-211ENST00000488279 SPHARQ15513 63 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 RBM48Q5RL73 367 aaKnown RBP17.73■□□□□ 0.43
PTPN4-211ENST00000488279 C1orf100Q5SVJ3 147 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 C6orf141Q5SZD1 244 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 OR10K2Q6IF99 312 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 CEACAM19Q7Z692 300 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 C5orf24Q7Z6I8 188 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 RNF152Q8N8N0 203 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 KCNG3Q8TAE7 436 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 DUX3Q96PT4 197 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 YPEL2Q96QA6 119 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 SULT4A1Q9BR01 284 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 FAAP24Q9BTP7 215 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 SCN3BQ9NY72 215 aa17.73■□□□□ 0.43
PTPN4-211ENST00000488279 IGF1P05019 195 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 CHATP28329 748 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 RAB25P57735 213 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 RPS27AP62979 156 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms