RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DHRS12A0PJE2 317 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 VPS37CA5D8V6 355 aaPredicted RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 ARRDC5A6NEK1 342 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 H3BPC8 53 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 BOLA2-SMG1P6H3BVE0 249 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 hCG_2039718K7EN88 272 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 PSMD11O00231 422 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 POLR3GO15318 223 aaPredicted RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 GIMD1P0DJR0 217 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 ALOX5APP20292 161 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 GABRA3P34903 492 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 DEKP35659 375 aaKnown RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 RANBP1P43487 201 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 EMP2P54851 167 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 PAFAH1B3Q15102 231 aaKnown RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 TRIP13Q15645 432 aaPredicted RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 ZBTB6Q15916 424 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 ZNF283Q8N7M2 679 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 YIPF7Q8N8F6 280 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 ASCC1Q8N9N2 400 aaKnown RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 OR2Y1Q8NGV0 311 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 FAM45AQ8TCE6 357 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 GPR22Q99680 433 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 NAA38Q9BRA0 125 aaKnown RBP0.42□□□□□ -2.34
SMC4-219ENST00000487747 FAAP24Q9BTP7 215 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 TIMM21Q9BVV7 248 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 CDCA4Q9BXL8 241 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 OR51E2Q9H255 320 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 FBXL15Q9H469 300 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 CLEC2DQ9UHP7 191 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 DLG5Q8TDM6 1919 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 RAB3GAP2Q9H2M9 1393 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 TNIKQ9UKE5 1360 aa0.42□□□□□ -2.34
SMC4-219ENST00000487747 DENND4BO75064 1496 aaPredicted RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 MGAT4DA6NG13 374 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 FBP1P09467 338 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 ZNF705DP0CH99 300 aaPredicted RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 ZNF705BP0CI00 300 aaPredicted RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 AKR1C4P17516 323 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 AQP5P55064 265 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 TSPEAR-AS2P59090 65 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 FGF12P61328 243 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 TSPAN5P62079 268 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 SKP2Q13309 424 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 C6orf183Q5T699 404 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 HENMT1Q5T8I9 393 aaKnown RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 Q6ZTI0 123 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 C2orf91Q6ZV80 131 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 COA5Q86WW8 74 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 OR11H1Q8NG94 326 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 OR11L1Q8NGX0 322 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 PGLYRP3Q96LB9 341 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 MAT2BQ9NZL9 334 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 DOK5Q9P104 306 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 RABL2AQ9UBK7 228 aaPredicted RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 PSMD13Q9UNM6 376 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 MRPS16Q9Y3D3 137 aaKnown RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 FAM215AQ9Y5M1 114 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 DISP1Q96F81 1524 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 KDM5BQ9UGL1 1544 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 DNMT1P26358 1616 aaKnown RBP0.41□□□□□ -2.34
SMC4-219ENST00000487747 NUMA1Q14980 2115 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 RTTNQ86VV8 2226 aa0.41□□□□□ -2.34
SMC4-219ENST00000487747 IGHV3-15A0A0B4J1V0 119 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 FABP7O15540 132 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 GNRH2O43555 120 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 PEBP1P30086 187 aaKnown RBP0.4□□□□□ -2.35
SMC4-219ENST00000487747 CD200P41217 278 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 ACTR1BP42025 376 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 VSNL1P62760 191 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 DEFA6Q01524 100 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 C18orf21Q32NC0 220 aaPredicted RBP0.4□□□□□ -2.35
SMC4-219ENST00000487747 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.4□□□□□ -2.35
SMC4-219ENST00000487747 AGTRAPQ6RW13 159 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 RASL11AQ6T310 242 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 MTERF4Q7Z6M4 381 aaKnown RBP0.4□□□□□ -2.35
SMC4-219ENST00000487747 C10orf126Q8N4M7 172 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 CDRT4Q8N9R6 151 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 OR5D18Q8NGL1 313 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 OR4P4Q8NGL7 312 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 OR10A6Q8NH74 314 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 ZNRF2Q8NHG8 242 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 SLC35G5Q96KT7 338 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 GLT1D1Q96MS3 346 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 EBNA1BP2Q99848 306 aaKnown RBP0.4□□□□□ -2.35
SMC4-219ENST00000487747 GTSF1LQ9H1H1 148 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 TMBIM4Q9HC24 238 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 TAS2R13Q9NYV9 303 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 FIS1Q9Y3D6 152 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 BZW2Q9Y6E2 419 aaKnown RBP0.4□□□□□ -2.35
SMC4-219ENST00000487747 KIAA2026Q5HYC2 2103 aa0.4□□□□□ -2.35
SMC4-219ENST00000487747 DSCAMO60469 2012 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 A0A1B0GX12 115 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 TMEM235A6NFC5 223 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 C11orf86A6NJI1 115 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 ZNF705FA8MVS1 300 aaPredicted RBP0.39□□□□□ -2.35
SMC4-219ENST00000487747 K7EQS6 105 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 CRXO43186 299 aaPredicted RBP0.39□□□□□ -2.35
SMC4-219ENST00000487747 CCL3P10147 92 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 SLC25A16P16260 332 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms