RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 HBG2P69892 147 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 ARF1P84077 181 aaKnown RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 CLN3Q13286 438 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 LINC00596Q86U02 117 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 C17orf78Q8N4C9 275 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 OR5A2Q8NGI9 324 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 OR2Y1Q8NGV0 311 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 OR4X1Q8NH49 305 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PSMF1Q92530 271 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 TMEM45BQ96B21 275 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF845Q96IR2 970 aaPredicted RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PRO1933Q9H354 126 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PLK3Q9H4B4 646 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PRDM6Q9NQX0 595 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 TRAV24A0A0B4J272 114 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 C5orf49A4QMS7 147 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 K7ESF4 209 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 HS3ST1O14792 307 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 MDKP21741 143 aaPredicted RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PMS2P11Q13670 270 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 UNQ6494/PRO21346Q6UXR6 183 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 SSX9Q7RTT3 188 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 TMEM183AQ8IXX5 376 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 OR10V1Q8NGI7 309 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PINX1Q96BK5 328 aaKnown RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 AGMATQ9BSE5 352 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 WDR61Q9GZS3 305 aaKnown RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 RBKSQ9H477 322 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 SRD5A3Q9H8P0 318 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 NAT8Q9UHE5 227 aa10.38□□□□□ -0.75
COL3A1-206ENST00000487010 CHD3Q12873 2000 aaKnown RBP10.38□□□□□ -0.75
COL3A1-206ENST00000487010 A0A087X0M5 115 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 A0A1B0GX30 115 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 LRP5LA4QPB2 252 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF737O75373 536 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 IGKV1-5P01602 117 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 IGLV2-14P01704 120 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 PFN1P07737 140 aaKnown RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 PAX1P15863 534 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 CXCL12P48061 93 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 LILRB2Q8N423 598 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 RDH5Q92781 318 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 MEGF10Q96KG7 1140 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF488Q96MN9 340 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 HIST1H2AAQ96QV6 131 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF552Q9H707 407 aaPredicted RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 CACNA1EQ15878 2313 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 A0A096LPE4 126 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 A0A1B0GV90 55 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 A0A1W2PPZ6 126 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 DVL1O14640 695 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 MRPL33O75394 65 aaKnown RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 CD55P08174 381 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 CCL4P13236 92 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 JOSD1Q15040 202 aaPredicted RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 DBX2Q6ZNG2 339 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 BEND4Q6ZU67 534 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 C16orf82Q7Z2V1 217 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 IFI44Q8TCB0 444 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 RNASEH2CQ8TDP1 164 aaKnown RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 APOBEC3DQ96AK3 386 aaPredicted RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 OR4C12Q96R67 309 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 GPR87Q9BY21 358 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 PRRG4Q9BZD6 226 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 LINC00470Q9BZP3 86 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 OR1A1Q9P1Q5 309 aa10.37□□□□□ -0.75
COL3A1-206ENST00000487010 MRPS18CQ9Y3D5 142 aaKnown RBP10.37□□□□□ -0.75
COL3A1-206ENST00000487010 PI4KAP42356 2102 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.36□□□□□ -0.75
COL3A1-206ENST00000487010 DEGS1O15121 323 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 SS18L1O75177 396 aaPredicted RBP10.36□□□□□ -0.75
COL3A1-206ENST00000487010 COX5BP10606 129 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 FOLR3P41439 243 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 ELLP55199 621 aaPredicted RBP10.36□□□□□ -0.75
COL3A1-206ENST00000487010 ADIRFQ15847 76 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 TMEM241Q24JQ0 296 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 C9orf135Q5VTT2 229 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 NCR3LG1Q68D85 454 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 TCEAL6Q6IPX3 200 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 IL1F10Q8WWZ1 152 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 OR5P3Q8WZ94 311 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 TAF15Q92804 592 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL3A1-206ENST00000487010 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 STRADBQ9C0K7 418 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 DLL3Q9NYJ7 618 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 PRSS50Q9UI38 385 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 PPP1R3CQ9UQK1 317 aa10.36□□□□□ -0.75
COL3A1-206ENST00000487010 IGKV3D-15A0A087WSY6 115 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 MKRN2OSH3BPM6 223 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 NGFP01138 241 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 AMBPP02760 352 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 GDF1P27539 372 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 GFRA1P56159 465 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 COL10A1Q03692 680 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms