RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 H0Y980 276 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 TRAPPC6AO75865 159 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 NPPCP23582 126 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
CCDC171-208ENST00000486641 SHBQ15464 509 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 PLPPR5Q32ZL2 321 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 LHFPL2Q6ZUX7 228 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM144Q7Z5S9 345 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 TAF15Q92804 592 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC171-208ENST00000486641 NABP1Q96AH0 204 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 SLC35E1Q96K37 410 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 RBM24Q9BX46 236 aaKnown RBP9.09□□□□□ -0.95
CCDC171-208ENST00000486641 SLC25A22Q9H936 323 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM9BQ9NQ34 198 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 WNT16Q9UBV4 365 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 HS3ST3A1Q9Y663 406 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 MYO15AQ9UKN7 3530 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 CHD9Q3L8U1 2897 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 RALGAPA1Q6GYQ0 2036 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 TCRBV21S2A2A0A5A6 115 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 H3BMH7 237 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 CCL25O15444 150 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 SYNGR2O43760 224 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 NDUFB8O95169 186 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 VENTXO95231 258 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 NRASP01111 189 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 RBM11P57052 281 aaKnown RBP9.09□□□□□ -0.95
CCDC171-208ENST00000486641 LINC00310P59036 64 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 TPPP2P59282 170 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 ACSM6Q6P461 480 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 HSPB9Q9BQS6 159 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 UBE2L5PA0A1B0GUS4 154 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 C20orf202A1L168 122 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 TLX3O43711 291 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-208ENST00000486641 PAGE4O60829 102 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 PSG2P11465 335 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 F2RP25116 425 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 COMPP49747 757 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-208ENST00000486641 MLF1P58340 268 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 SSPNQ14714 243 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-208ENST00000486641 STPG4Q8N801 248 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 OR10V1Q8NGI7 309 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 C22orf15Q8WYQ4 148 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 EXTL1Q92935 676 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 SPTSSAQ969W0 71 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 CIB3Q96Q77 187 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-208ENST00000486641 PATZ1Q9HBE1 687 aaKnown RBP9.08□□□□□ -0.96
CCDC171-208ENST00000486641 KLRF1Q9NZS2 232 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 DOCK11Q5JSL3 2073 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 EXPH5Q8NEV8 1989 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 IGKV1-6A0A0C4DH72 117 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 SPTY2D1-AS1A0A0U1RR47 76 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 MLNRO43193 412 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 TUSC2O75896 110 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 WNT2P09544 360 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 TDGF1P13385 188 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 DRD1P21728 446 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 PPP1CBP62140 327 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 SELENOTP62341 195 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 HBG1P69891 147 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 HBG2P69892 147 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 OR1K1Q8NGR3 316 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 OR51H1Q8NH63 302 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 RNF208Q9H0X6 261 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 ELOVL5Q9NYP7 299 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 IL36GQ9NZH8 169 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 CACNG5Q9UF02 275 aa9.08□□□□□ -0.96
CCDC171-208ENST00000486641 AQP7P3A6NL99 342 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 SLC25A6P12236 298 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 EGR1P18146 543 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 FBLP22087 321 aaKnown RBP9.07□□□□□ -0.96
CCDC171-208ENST00000486641 PTTG1IPP53801 180 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 FOXL1Q12952 345 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 SPANXN5Q5MJ07 72 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 LINC01551Q86U37 167 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 ZDHHC23Q8IYP9 409 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 CPEB3Q8NE35 698 aaKnown RBP9.07□□□□□ -0.96
CCDC171-208ENST00000486641 NEIL1Q96FI4 390 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-208ENST00000486641 GAL3ST2Q9H3Q3 398 aa9.07□□□□□ -0.96
CCDC171-208ENST00000486641 NKX6-3A6NJ46 265 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 SERF1AO75920 110 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 IGKV1-39P01597 117 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 IGKV1D-39P04432 117 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 SERPINE2P07093 398 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 C1QTNF9P0C862 333 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 C10orf128Q5T292 105 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 LEMD1Q68G75 181 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 PARM1Q6UWI2 310 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 Q6ZS49 121 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 SGMS2Q8NHU3 365 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF837Q96EG3 531 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-208ENST00000486641 LRRC61Q9BV99 259 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 PARD6GQ9BYG4 376 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-208ENST00000486641 FBRSQ9HAH7 460 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
CCDC171-208ENST00000486641 TRBV11-1A0A0K0K1C0 115 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 CTXND1A0A1B0GTU2 59 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms