RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 XRCC3O43542 346 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 GGCTO75223 188 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 S1PR2O95136 353 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 PTHP01270 115 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 CD74P04233 296 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 WNT2P09544 360 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 HIST1H1EP10412 219 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF250P15622 560 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 RPS4Y1P22090 263 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 AADACP22760 399 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 PSMA1P25786 263 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 CRISP3P54108 245 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 RPS20P60866 119 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF154Q13106 437 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 MELKQ14680 651 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 MS4A18Q3C1V0 323 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 TMEM268Q5VZI3 342 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF529Q6P280 563 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 PLET1Q6UQ28 207 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 DCDC5Q6ZRR9 648 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 UEVLDQ8IX04 471 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 C20orf196Q8IYI0 205 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 BCL6BQ8N143 479 aaPredicted RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 PARP16Q8N5Y8 322 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 POC1AQ8NBT0 407 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 DEFB108BQ8NET1 73 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 OR52I1Q8NGK6 324 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 OR1J2Q8NGS2 313 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 OR6N1Q8NGY5 312 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 OR4F5Q8NH21 305 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 OR52P1PQ8NH57 321 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 TNFAIP8L1Q8WVP5 186 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 CCL17Q92583 94 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 GHSRQ92847 366 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 RPEQ96AT9 228 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 CPNE2Q96FN4 548 aaPredicted RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 CXorf58Q96LI9 332 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 TMEM208Q9BTX3 173 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 FUNDC2Q9BWH2 189 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 NXF2Q9GZY0 626 aaKnown RBP5.62□□□□□ -1.51
HDAC3-209ENST00000486618 TXNIPQ9H3M7 391 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 ASIC5Q9NY37 505 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 C1RLQ9NZP8 487 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 B3GAT1Q9P2W7 334 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 TRBV9A0A0B4J1U6 114 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 SMIM9A6NGZ8 99 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 ARPC1BO15143 372 aaKnown RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 SIGLEC5O15389 551 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 RGS16O15492 202 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 CYB5BO43169 146 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 IGHMP01871 453 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 BPGMP07738 259 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 OMGP23515 440 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 GRPRP30550 384 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 RPL13AP40429 203 aaKnown RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 CD200P41217 278 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 FUT6P51993 359 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF134P52741 427 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 AQP5P55064 265 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 TBC1D28Q2M2D7 210 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 TCTEX1D4Q5JR98 221 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 KLF17Q5JT82 389 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 SAMD13Q5VXD3 122 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 OLFML2AQ68BL7 652 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 UNQ6126/PRO20091Q6UXV3 157 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 CCDC190Q86UF4 302 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 IZUMO1Q8IYV9 350 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 SPICQ8N5J4 248 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 EIF4E3Q8N5X7 224 aaKnown RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 KIR3DL3Q8N743 410 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 SLC30A7Q8NEW0 376 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 OR10V1Q8NGI7 309 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 OR52E2Q8NGJ4 325 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 OR2AE1Q8NHA4 323 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 BAALCQ8WXS3 180 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 TMEM37Q8WXS4 190 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 BPIFA2Q96DR5 249 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 FYTTD1Q96QD9 318 aaKnown RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 OR52E6Q96RD3 313 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 CNN2Q99439 309 aaKnown RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 NAA50Q9GZZ1 169 aaKnown RBP5.61□□□□□ -1.51
HDAC3-209ENST00000486618 RNF121Q9H920 327 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 GNG8Q9UK08 70 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 NBEAL2Q6ZNJ1 2754 aa5.61□□□□□ -1.51
HDAC3-209ENST00000486618 PRKDCP78527 4128 aaKnown RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 TRAV36DV7A0A075B6V5 113 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 IQCMA0A1B0GVH7 501 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 CLPSL1A2RUU4 121 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 LRRC30A6NM36 301 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 H7C2Y5 167 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 GPR31O00270 319 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SLC17A3O00476 420 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 FGF16O43320 207 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 PDE6DO43924 150 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 GPANK1O95872 356 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 IGHV3-13P01766 116 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SHBGP04278 402 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms