RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 A0A1B0GW64 132 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF724A8MTY0 619 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 SYNGR3O43761 229 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 PRH1P02810 166 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 GLAP06280 429 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 CD3EP07766 207 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ADCYAP1P18509 176 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 FUT3P21217 361 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 KIR2DS4P43632 304 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 KCNJ3P48549 501 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 AKR1D1P51857 326 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM187Q14656 261 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 KIR2DS1Q14954 304 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 SLC22A25Q6T423 547 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 CLEC9AQ6UXN8 241 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 FOXRED2Q8IWF2 684 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF565Q8N9K5 539 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 BOLLQ8N9W6 283 aaKnown RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TOMM40LQ969M1 308 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM45BQ96B21 275 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF385AQ96PM9 386 aaKnown RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM204Q9BSN7 226 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TLNRD1Q9H1K6 362 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 PLK3Q9H4B4 646 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 LAMP3Q9UQV4 416 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 RNF115Q9Y4L5 304 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 SMAD7O15105 426 aaKnown RBP7.66□□□□□ -1.18
COL12A1-208ENST00000486533 RAMP1O60894 148 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 IGHV3-9P01782 118 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 MT-ND4LP03901 98 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 S100A6P06703 90 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 DANCRP0C864 163 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 CD80P33681 288 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 LPAR6P43657 344 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 RND3P61587 244 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 VAMP2P63027 116 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 BAXQ07812 192 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 KRTAP27-1Q3LI81 207 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 PLCXD3Q63HM9 321 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 ABLIM2Q6H8Q1 611 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 PRSS57Q6UWY2 283 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 DPPA3Q6W0C5 159 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 C1QL2Q7Z5L3 287 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 DPPA2Q7Z7J5 298 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF611Q8N823 705 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 GLYATL2Q8WU03 294 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 MRPL24Q96A35 216 aaKnown RBP7.66□□□□□ -1.18
COL12A1-208ENST00000486533 APH1AQ96BI3 265 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 MUCL1Q96DR8 90 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 GNPNAT1Q96EK6 184 aaPredicted RBP7.66□□□□□ -1.18
COL12A1-208ENST00000486533 MARS2Q96GW9 593 aaKnown RBP7.66□□□□□ -1.18
COL12A1-208ENST00000486533 FOXB1Q99853 325 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 SOX7Q9BT81 388 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 RSRP1Q9BUV0 290 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF442Q9H7R0 627 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 SPACA1Q9HBV2 294 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 SLC2A9Q9NRM0 540 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 AMDHD2Q9Y303 409 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 NOSIPQ9Y314 301 aaKnown RBP7.66□□□□□ -1.18
COL12A1-208ENST00000486533 CSPG4Q6UVK1 2322 aa7.66□□□□□ -1.18
COL12A1-208ENST00000486533 IGKV3D-15A0A087WSY6 115 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 hCG_38984A0A1B0GV85 526 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 HBE1P02100 147 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 MBPP02686 304 aaPredicted RBP7.65□□□□□ -1.18
COL12A1-208ENST00000486533 TK1P04183 234 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 OR5AC1P0C628 307 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 SPP1P10451 314 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 COX5BP10606 129 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 HOXB4P17483 251 aaPredicted RBP7.65□□□□□ -1.18
COL12A1-208ENST00000486533 IGHV1-2P23083 117 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 PTAFRP25105 342 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 AKR1C2P52895 323 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 UCP2P55851 309 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 ATP5J2P56134 94 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 RBM11P57052 281 aaKnown RBP7.65□□□□□ -1.18
COL12A1-208ENST00000486533 AKR1C1Q04828 323 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 BSPH1Q075Z2 132 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF616Q08AN1 781 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 OR8G1Q15617 311 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 TAF9Q16594 264 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 GUK1Q16774 197 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 MPV17LQ2QL34 196 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 NCMAPQ5T1S8 102 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 ADAM5Q6NVV9 412 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM88Q6PEY1 159 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 CBLN2Q8IUK8 224 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 CIARTQ8N365 385 aaPredicted RBP7.65□□□□□ -1.18
COL12A1-208ENST00000486533 OR1J1Q8NGS3 322 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 MAFIPQ8WZ33 124 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 NEUROG1Q92886 237 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 IL22RA2Q969J5 263 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 FBXO17Q96EF6 278 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 FAAP24Q9BTP7 215 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 LINC00470Q9BZP3 86 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 OR2H1Q9GZK4 316 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 C19orf12Q9NSK7 152 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 ST3GAL6Q9Y274 331 aa7.65□□□□□ -1.18
COL12A1-208ENST00000486533 JMJD1CQ15652 2540 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF716A6NP11 495 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 RPL36A-HNRNPH2H7BZ11 118 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms