RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 OR51H1Q8NH63 302 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 UBALD1Q8TB05 177 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 MEGF10Q96KG7 1140 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 OR2V2Q96R30 315 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 SEBOXQ9HB31 216 aaPredicted RBP17.09■□□□□ 0.33
HPS3-206ENST00000486530 PIEZO2Q9H5I5 2752 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 KRBOX1C9JBD0 128 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 TEX46H3BTG2 121 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 SERPINE2P07093 398 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 CD40P25942 277 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 SELENOVP59797 346 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 KRBOX4Q5JUW0 171 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 DMBX1Q8NFW5 382 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 METRNQ9UJH8 293 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 KCNS2Q9ULS6 477 aa17.08■□□□□ 0.33
HPS3-206ENST00000486530 IGF2RP11717 2491 aa17.08■□□□□ 0.32
HPS3-206ENST00000486530 C16orf97H3BN30 126 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 EGR1P18146 543 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 IL2RGP31785 369 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 CD177Q8N6Q3 437 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 OR1L1Q8NH94 360 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 TOLLIPQ9H0E2 274 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 LIN7CQ9NUP9 197 aaKnown RBP17.07■□□□□ 0.32
HPS3-206ENST00000486530 CADP27708 2225 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 PVALBP20472 110 aaPredicted RBP17.07■□□□□ 0.32
HPS3-206ENST00000486530 PRDX2P32119 198 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 TRAT1Q6PIZ9 186 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 NUP37Q8NFH4 326 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 C11orf1Q9H5F2 150 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 ZDHHC8Q9ULC8 765 aa17.07■□□□□ 0.32
HPS3-206ENST00000486530 HBZP02008 142 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 TFF1P04155 84 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 OR8U9P0C7N5 309 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 PSG2P11465 335 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 SLC25A6P12236 298 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 TMEM108Q6UXF1 575 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 C22orf34Q6ZV56 151 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 SSX8Q7RTT4 187 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 UBAC2Q8NBM4 344 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 OR8U1Q8NH10 309 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 ERGIC1Q969X5 290 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 LURAP1Q96LR2 239 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 LINC00052Q96N35 136 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 MRPL37Q9BZE1 423 aaKnown RBP17.06■□□□□ 0.32
HPS3-206ENST00000486530 PARP12Q9H0J9 701 aaKnown RBP17.06■□□□□ 0.32
HPS3-206ENST00000486530 TAS2R3Q9NYW6 316 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 JKAMPQ9P055 326 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 PPP1R3CQ9UQK1 317 aa17.06■□□□□ 0.32
HPS3-206ENST00000486530 SPRY3O43610 288 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 RBPJQ06330 500 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 MOGAT3Q86VF5 341 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 GCSAMQ8N6F7 178 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 ZBTB34Q8NCN2 500 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 MRGPRDQ8TDS7 321 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 NINJ1Q92982 152 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 SMIM3Q9BZL3 60 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 PLEKHF2Q9H8W4 249 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 RNF212BA8MTL3 300 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 FAM157CP0CG43 387 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 GATA4P43694 442 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 DRAM1Q8N682 238 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 ZNF645Q8N7E2 425 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 OR1S2Q8NGQ3 325 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 PPP1R35Q8TAP8 253 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 ITLN1Q8WWA0 313 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 LPAR3Q9UBY5 353 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 SH3BGRL2Q9UJC5 107 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 NUP50Q9UKX7 468 aa17.05■□□□□ 0.32
HPS3-206ENST00000486530 RP1L1Q8IWN7 2480 aaPredicted RBP17.05■□□□□ 0.32
HPS3-206ENST00000486530 IGKV1D-17A0A075B6S4 117 aa17.04■□□□□ 0.32
HPS3-206ENST00000486530 BORCS7-ASMTA0A0B4J1R7 106 aa17.04■□□□□ 0.32
HPS3-206ENST00000486530 ZNF737O75373 536 aa17.04■□□□□ 0.32
HPS3-206ENST00000486530 MMP9P14780 707 aa17.04■□□□□ 0.32
HPS3-206ENST00000486530 GLIPR1P48060 266 aa17.04■□□□□ 0.32
HPS3-206ENST00000486530 OR2C3Q8N628 320 aa17.04■□□□□ 0.32
HPS3-206ENST00000486530 A0A1B0GU03 582 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 PTAFRP25105 342 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 POLR2GP62487 172 aaKnown RBP eCLIP17.03■□□□□ 0.32
HPS3-206ENST00000486530 ID3Q02535 119 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 OR13A1Q8NGR1 328 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 LSM10Q969L4 123 aaKnown RBP17.03■□□□□ 0.32
HPS3-206ENST00000486530 MARC2Q969Z3 335 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 SAT2Q96F10 170 aaPredicted RBP17.03■□□□□ 0.32
HPS3-206ENST00000486530 SNX22Q96L94 193 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 MAP1BP46821 2468 aaKnown RBP17.03■□□□□ 0.32
HPS3-206ENST00000486530 RAB19A4D1S5 217 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 NUDT19A8MXV4 375 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 LGALS8O00214 317 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 SSSCA1O60232 199 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 LHBP01229 141 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 VAMP2P63027 116 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 MSMO1Q15800 293 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 CXorf66Q5JRM2 361 aaPredicted RBP17.03■□□□□ 0.32
HPS3-206ENST00000486530 BOLLQ8N9W6 283 aaKnown RBP17.03■□□□□ 0.32
HPS3-206ENST00000486530 OR52L2PQ8NGH6 319 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 ARV1Q9H2C2 271 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 IL19Q9UHD0 177 aa17.03■□□□□ 0.32
HPS3-206ENST00000486530 ZNF705EA8MWA4 302 aaPredicted RBP17.02■□□□□ 0.32
HPS3-206ENST00000486530 CRYZL1O95825 349 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms