RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 ALG5Q9Y673 324 aa2□□□□□ -2.09
VPS41-213ENST00000485955 V9GY05 133 aa2□□□□□ -2.09
VPS41-213ENST00000485955 PLXNB2O15031 1838 aa2□□□□□ -2.09
VPS41-213ENST00000485955 SETD2Q9BYW2 2564 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 CSMD1Q96PZ7 3565 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 FANCIQ9NVI1 1328 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 PSME4Q14997 1843 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 IGHV2OR16-5A0A0B4J2B6 119 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 A0A0G2JN53 185 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 CLDN24A6NM45 220 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 LOC110117498-PIK3R3F6TDL0 507 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ZNF593O00488 134 aaPredicted RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 FABP7O15540 132 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 MBTPS2O43462 519 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 NOS1APO75052 506 aaPredicted RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 SS18L1O75177 396 aaPredicted RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 SPAG7O75391 227 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 OR2B3O76000 313 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SLC22A5O76082 557 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 HPRT1P00492 218 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ARG1P05089 322 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 CRHP06850 196 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SCGB1A1P11684 91 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 USF1P22415 310 aaPredicted RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 ELK4P28324 431 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 GPX4P36969 197 aaPredicted RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 GALR1P47211 349 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SULT1A1P50225 295 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SULT1A2P50226 295 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 RAB7AP51149 207 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 UBE2E1P51965 193 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 CRYBA4P53673 196 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 DLX1P56177 255 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 RAB38P57729 211 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 RBX1P62877 108 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 BTN3A2P78410 334 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SLC25A11Q02978 314 aaKnown RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 TWF1Q12792 350 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 FAM53BQ14153 422 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 HLA-DRB5Q30154 266 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 GPRC6AQ5T6X5 926 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 C11orf71Q6IPW1 123 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 OLIG3Q7RTU3 272 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 NIT1Q86X76 327 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 C10orf107Q8IVU9 208 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SLC30A8Q8IWU4 369 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 CPNE9Q8IYJ1 553 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ARRDC1Q8N5I2 433 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SPICQ8N5J4 248 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 CLDN22Q8N7P3 220 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ZNF615Q8N8J6 731 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 CYB561D1Q8N8Q1 229 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ZNF709Q8N972 641 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ZNF557Q8N988 423 aaPredicted RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 GPR32P1Q8NGA4 272 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 OR4K17Q8NGC6 315 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 OR10W1Q8NGF6 305 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 COQ8AQ8NI60 647 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 RNASE11Q8TAA1 199 aaKnown RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 TMEM234Q8WY98 164 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 MRAP2Q96G30 205 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SFRP2Q96HF1 295 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 OR10C1Q96KK4 312 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 UBE2E2Q96LR5 201 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 HIST1H4GQ99525 98 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 TSC22D3Q99576 134 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 RARRES2Q99969 163 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 PDCD1LG2Q9BQ51 273 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 AIF1LQ9BQI0 150 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 TIPINQ9BVW5 301 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SLC19A3Q9BZV2 496 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 ACTR6Q9GZN1 396 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 MAP1LC3AQ9H492 121 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 UGT1A8Q9HAW9 530 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 TMEM9BQ9NQ34 198 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 FAM206AQ9NX38 181 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 DEC1Q9P2X7 70 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 RWDD2AQ9UIY3 292 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 VPREB3Q9UKI3 123 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 MMP17Q9ULZ9 603 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 HHLA2Q9UM44 414 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SLC7A11Q9UPY5 501 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 TP53TG1Q9Y2A0 90 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 OR51B2Q9Y5P1 312 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 SNX10Q9Y5X0 201 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 FANCMQ8IYD8 2048 aa1.99□□□□□ -2.09
VPS41-213ENST00000485955 TLN1Q9Y490 2541 aaKnown RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
VPS41-213ENST00000485955 NID2Q14112 1375 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 DOPEY2Q9Y3R5 2298 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 ZBED9Q6R2W3 1325 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 LRRC37AA6NMS7 1700 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 FAM240AA0A1B0GVK7 77 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 DAPL1A0PJW8 107 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 A6NDN8 102 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 OR6C6A6NF89 314 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 MIF4GDA9UHW6 222 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 ZNF878C9JN71 531 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 ANKRD65E5RJM6 399 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 F5H5K5 113 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms