RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 VHLP40337 213 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 FUT6P51993 359 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 TPPP2P59282 170 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 MAGOHP61326 146 aaKnown RBP4.9□□□□□ -1.63
SMC4-217ENST00000485867 KLF5Q13887 457 aaPredicted RBP4.9□□□□□ -1.63
SMC4-217ENST00000485867 LRRC36Q1X8D7 754 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 SAMD4BQ5PRF9 694 aaKnown RBP4.9□□□□□ -1.63
SMC4-217ENST00000485867 PXDC1Q5TGL8 231 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 Q6P435 159 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 DEGS2Q6QHC5 323 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 ARPINQ7Z6K5 226 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 CROCCP2Q86T23 111 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 LINC00311Q8N616 119 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 MAPKAPK5-AS1Q8N8E1 139 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 OR2T33Q8NG76 320 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 OR10A7Q8NGE5 316 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 OR2K2Q8NGT1 345 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 OTULINQ96BN8 352 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 BORCS8Q96FH0 119 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 OR51V1Q9H2C8 321 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 INTS9Q9NV88 658 aaKnown RBP4.9□□□□□ -1.63
SMC4-217ENST00000485867 LAMP5Q9UJQ1 280 aa4.9□□□□□ -1.63
SMC4-217ENST00000485867 MEIKINA0A087WXM9 373 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 IGKV1-12A0A0C4DH73 117 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 LOC110117498-PIK3R3F6TDL0 507 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 XRCC3O43542 346 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 GATBO75879 557 aaKnown RBP4.89□□□□□ -1.63
SMC4-217ENST00000485867 CYB5AP00167 134 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 IGKV1D-12P01611 117 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 CCL1P22362 96 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 C21orf33P30042 268 aaPredicted RBP4.89□□□□□ -1.63
SMC4-217ENST00000485867 ZNF137PP52743 207 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 RIDAP52758 137 aaKnown RBP4.89□□□□□ -1.63
SMC4-217ENST00000485867 HCCSP53701 268 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 SYNJ2BPP57105 145 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 ZNF45Q02386 682 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 SCN1BQ07699 218 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 APOFQ13790 326 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 C5orf64Q2M2E5 130 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 METTL21CQ5VZV1 264 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 PYHIN1Q6K0P9 492 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 ZNF679Q8IYX0 411 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 ELMOD2Q8IZ81 293 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 RDH10Q8IZV5 341 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 TCTEX1D1Q8N7M0 179 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 ZNF565Q8N9K5 539 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 CHST4Q8NCG5 386 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 OR51T1Q8NGJ9 327 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 MRGPRDQ8TDS7 321 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 TLCD1Q96CP7 247 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 RCN3Q96D15 328 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 MS4A10Q96PG2 267 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 GGTLC1Q9BX51 225 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 MROQ9BYG7 248 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 ANKRD60Q9BZ19 345 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 TTTY10Q9BZA0 68 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 CHST5Q9GZS9 411 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 CST11Q9H112 138 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 NCOR1P1Q9H4R4 102 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 MOB1AQ9H8S9 216 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 RANGRFQ9HD47 186 aaPredicted RBP4.89□□□□□ -1.63
SMC4-217ENST00000485867 IL1RAPQ9NPH3 570 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 NDE1Q9NXR1 346 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 GTF2A1LQ9UNN4 478 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 SAMD4AQ9UPU9 718 aaKnown RBP4.89□□□□□ -1.63
SMC4-217ENST00000485867 TP53TG1Q9Y2A0 90 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 V9GYQ6 96 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
SMC4-217ENST00000485867 TRAV39A0A0B4J263 110 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 HSPB6O14558 160 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 NBR2O15453 112 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 TXNL1O43396 289 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 ZNF254O75437 659 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 E2F6O75461 281 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 IL3RAP26951 378 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 BMI1P35226 326 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 RBP2P50120 134 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 ACTBP60709 375 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 MAPRE2Q15555 327 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 BCL2L15Q5TBC7 163 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 WDR93Q6P2C0 686 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 FAHD1Q6P587 224 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 CD200R1LQ6Q8B3 271 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 IQCF1Q8N6M8 205 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 TMEM217Q8N7C4 229 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 GVQW1Q8N7I0 195 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 C8orf31Q8N9H6 132 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 PRSS3P2Q8NHM4 247 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 RNF183Q96D59 192 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 YIPF3Q9GZM5 350 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 CNOT2Q9NZN8 540 aaKnown RBP4.88□□□□□ -1.63
SMC4-217ENST00000485867 OR52A1Q9UKL2 312 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 ERGIC3Q9Y282 383 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 NUBP2Q9Y5Y2 271 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 A3GALT2U3KPV4 340 aa4.88□□□□□ -1.63
SMC4-217ENST00000485867 APOBP04114 4563 aaKnown RBP4.88□□□□□ -1.63
SMC4-217ENST00000485867 LOC102724200A0A096LPH7 203 aaPredicted RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 IGKV1-9A0A0C4DH69 117 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 A0A0G2JND7 137 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms