RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 BANF2Q9H503 90 aa13.48□□□□□ -0.25
SMC4-216ENST00000485645 ZMAT5Q9UDW3 170 aaKnown RBP13.48□□□□□ -0.25
SMC4-216ENST00000485645 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 ZNF736B4DX44 427 aaPredicted RBP13.47□□□□□ -0.25
SMC4-216ENST00000485645 CCL24O00175 119 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 CA11O75493 328 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 CRTAPO75718 401 aaPredicted RBP13.47□□□□□ -0.25
SMC4-216ENST00000485645 MGMTP16455 207 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 ZNF134P52741 427 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 RAB25P57735 213 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 CD69Q07108 199 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 CT45A1Q5HYN5 189 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 STEAP3Q658P3 488 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 AHSA2Q719I0 299 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 OR1L1Q8NH94 360 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 CT45A3Q8NHU0 189 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 RAX2Q96IS3 184 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 DUX3Q96PT4 197 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
SMC4-216ENST00000485645 GLAP06280 429 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 ELANEP08246 267 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 RCC1P18754 421 aaPredicted RBP13.46□□□□□ -0.25
SMC4-216ENST00000485645 FUT3P21217 361 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 SOX6P35712 828 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.25
SMC4-216ENST00000485645 FOXE3Q13461 319 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 DCTN2Q13561 401 aaKnown RBP13.46□□□□□ -0.25
SMC4-216ENST00000485645 DOC2BQ14184 412 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 C6orf141Q5SZD1 244 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 C11orf87Q6NUJ2 197 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 OR8U1Q8NH10 309 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 DERL3Q96Q80 235 aa13.46□□□□□ -0.25
SMC4-216ENST00000485645 COL7A1Q02388 2944 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 UBE2QL1A1L167 161 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 MYL12BO14950 172 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 SC5DO75845 299 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 CD1AP06126 327 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 CELP19835 753 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 VDAC1P21796 283 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 VHLP40337 213 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 CDX1P47902 265 aaPredicted RBP13.45□□□□□ -0.26
SMC4-216ENST00000485645 F2RL1P55085 397 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 DGCR2P98153 550 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 KIR2DS1Q14954 304 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 LYPD6Q86Y78 171 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 NKAIN3Q8N8D7 197 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 RNF152Q8N8N0 203 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 THRSPQ92748 146 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 Q96M66 194 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 B9D2Q9BPU9 175 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 HSPB9Q9BQS6 159 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 OR2S2Q9NQN1 319 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
SMC4-216ENST00000485645 LANCL1O43813 399 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 MYF6P23409 242 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
SMC4-216ENST00000485645 WNT4P56705 351 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 MORN2Q502X0 79 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 ZNF554Q86TJ5 538 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 OR5M8Q8NGP6 311 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 RBMXL1Q96E39 390 aaKnown RBP13.44□□□□□ -0.26
SMC4-216ENST00000485645 UQCC2Q9BRT2 126 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 ANKRD60Q9BZ19 345 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 MBNL3Q9NUK0 354 aaKnown RBP13.44□□□□□ -0.26
SMC4-216ENST00000485645 GHRLQ9UBU3 117 aa13.44□□□□□ -0.26
SMC4-216ENST00000485645 RAMP3O60896 148 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 PDCD6O75340 191 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 ATP6V1G2O95670 118 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 IGHG4P01861 327 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 IGF1P05019 195 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 CDK1P06493 297 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 HSPA13P48723 471 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 CFHR3Q02985 330 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 LSAMPQ13449 338 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 MMDQ15546 238 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 RNLSQ5VYX0 342 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 NANOGP1Q8N7R0 232 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 OR52L2PQ8NGH6 319 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 FAM46BQ96A09 425 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 ABHD14AQ9BUJ0 271 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMC4-216ENST00000485645 SCN3BQ9NY72 215 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 ZNF107Q9UII5 783 aaPredicted RBP13.43□□□□□ -0.26
SMC4-216ENST00000485645 ERGIC3Q9Y282 383 aa13.43□□□□□ -0.26
SMC4-216ENST00000485645 PTGES3LE9PB15 166 aa13.42□□□□□ -0.26
SMC4-216ENST00000485645 OR5H8P0DN80 308 aa13.42□□□□□ -0.26
SMC4-216ENST00000485645 SLC2A2P11168 524 aaPredicted RBP13.42□□□□□ -0.26
SMC4-216ENST00000485645 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
SMC4-216ENST00000485645 KCTD7Q96MP8 289 aa13.42□□□□□ -0.26
SMC4-216ENST00000485645 CHCHD6Q9BRQ6 235 aa13.42□□□□□ -0.26
SMC4-216ENST00000485645 CST11Q9H112 138 aa13.42□□□□□ -0.26
SMC4-216ENST00000485645 ZNF580Q9UK33 172 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms