RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ZNF69Q9UC07 566 aa11.57□□□□□ -0.56
SMAD9-204ENST00000483941 SLC22A5O76082 557 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 HBZP02008 142 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 SLC25A16P16260 332 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 FPR2P25090 351 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 UCP3P55916 312 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 TAS2R31P59538 309 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 FAAP20Q6NZ36 180 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 Q6ZNX1 250 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 LHFPL1Q86WI0 220 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 PRR18Q8N4B5 295 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 OR52M1Q8NGK5 317 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 OR13A1Q8NGR1 328 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 EDARADDQ8WWZ3 215 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 PERPQ96FX8 193 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF714Q96N38 554 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 DCTN5Q9BTE1 182 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 SSBP3Q9BWW4 388 aaPredicted RBP11.56□□□□□ -0.56
SMAD9-204ENST00000483941 C20orf85Q9H1P6 137 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 LINC00574Q9H8X3 128 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 OR2S2Q9NQN1 319 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 CALYQ9NYX4 217 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 JPT1Q9UK76 154 aa11.56□□□□□ -0.56
SMAD9-204ENST00000483941 C14orf166Q9Y224 244 aaKnown RBP11.56□□□□□ -0.56
SMAD9-204ENST00000483941 SONP18583 2426 aaKnown RBP11.56□□□□□ -0.56
SMAD9-204ENST00000483941 USF3Q68DE3 2245 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 F5H0A9 414 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 F2RL2O00254 374 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 PEX14O75381 377 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 RBP4P02753 201 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 RLN1P04808 185 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 LIPFP07098 398 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 SELLP14151 372 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 UBE2MP61081 183 aaKnown RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 Q3ZCU0 254 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 IGSF11Q5DX21 431 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 LY6G6FQ5SQ64 297 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 FAHD2BQ6P2I3 314 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF841Q6ZN19 808 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 SLC38A6Q8IZM9 456 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 C8orf46Q8TAG6 207 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 C10orf105Q8TEF2 133 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 MOB3AQ96BX8 217 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 FAHD2AQ96GK7 314 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF486Q96H40 463 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 TOLLIPQ9H0E2 274 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 ALX4Q9H161 411 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 GHITMQ9H3K2 345 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 GPN1Q9HCN4 374 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-204ENST00000483941 CTSZQ9UBR2 303 aa11.55□□□□□ -0.56
SMAD9-204ENST00000483941 LOC105371242A0A075B767 164 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 A0A1B0GW55 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 RNF212BA8MTL3 300 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 C15orf65H3BRN8 121 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 FOXH1O75593 365 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 TUSC2O75896 110 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 PPYP01298 95 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L2P0CJ85 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L3P0CJ86 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L4P0CJ87 422 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L5P0CJ88 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L6P0CJ89 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L7P0CJ90 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF728P0DKX0 622 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 PGAM2P15259 253 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 RBMXP38159 391 aaKnown RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 CEACAM6P40199 344 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 MECP2P51608 486 aaKnown RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 LUMP51884 338 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 TMEM200BQ69YZ2 307 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 ZNF660Q6AZW8 331 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4L9Q6RFH8 374 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 PRSS57Q6UWY2 283 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 Q6ZPA2 131 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 H1FOOQ8IZA3 346 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 OR13C8Q8NGS7 320 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 MMP28Q9H239 520 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 GNG12Q9UBI6 72 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 DUX4Q9UBX2 424 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 OR2W1Q9Y3N9 320 aa11.54□□□□□ -0.56
SMAD9-204ENST00000483941 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
SMAD9-204ENST00000483941 TRAV6A0A075B6T7 132 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 TRAV39A0A0B4J263 110 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 ITGB1BP1O14713 200 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 ARPC1BO15143 372 aaKnown RBP11.53□□□□□ -0.56
SMAD9-204ENST00000483941 YPEL1O60688 119 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 IGHV2-5P01817 119 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 IL5P05113 134 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 CGB3P0DN86 165 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 CGB7P0DN87 165 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 NFYAP23511 347 aaPredicted RBP11.53□□□□□ -0.56
SMAD9-204ENST00000483941 SSTR5P35346 364 aa11.53□□□□□ -0.56
SMAD9-204ENST00000483941 RAB7AP51149 207 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms