RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 RPEQ96AT9 228 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 CMSS1Q9BQ75 279 aaKnown RBP7.08□□□□□ -1.28
SNX4-205ENST00000482965 HDHD3Q9BSH5 251 aaPredicted RBP7.08□□□□□ -1.28
SNX4-205ENST00000482965 FUNDC2Q9BWH2 189 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 RAB18Q9NP72 206 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 C12orf4Q9NQ89 552 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 C1RLQ9NZP8 487 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 ABRACLQ9P1F3 81 aa7.08□□□□□ -1.28
SNX4-205ENST00000482965 TRBV6-6A0A0A6YYG2 114 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 OOSP1A8MZH6 123 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 LY6LH3BQJ8 138 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 RAB27BO00194 218 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 NDUFA7O95182 113 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 GNB3P16520 340 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 IL3RAP26951 378 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 BRS3P32247 399 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 MNDAP41218 407 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 SERPINB10P48595 397 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 COMPP49747 757 aaPredicted RBP7.07□□□□□ -1.28
SNX4-205ENST00000482965 DYNLT3P51808 116 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 LOXL3P58215 753 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 HLA-DRB3P79483 266 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 MADCAM1Q13477 382 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 HMGN3Q15651 99 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 Q3ZCU0 254 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 OLFML2AQ68BL7 652 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 FAM53AQ6NSI3 398 aaPredicted RBP7.07□□□□□ -1.28
SNX4-205ENST00000482965 ZNF880Q6PDB4 577 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 C5orf24Q7Z6I8 188 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 CROCCP3Q8IVE0 287 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 LINC00311Q8N616 119 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 C3orf56Q8N813 242 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 PIFOQ8TCI5 191 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 IL1F10Q8WWZ1 152 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 GALMQ96C23 342 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 OR2S2Q9NQN1 319 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 JPT1Q9UK76 154 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 PITPNC1Q9UKF7 332 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 MGAT4AQ9UM21 535 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 TCF19Q9Y242 345 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 ETV7Q9Y603 341 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 STAB1Q9NY15 2570 aa7.07□□□□□ -1.28
SNX4-205ENST00000482965 A0A1B0GUS0 222 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 A6NDX4 124 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 SERPINE3A8MV23 424 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 MFNGO00587 321 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 SLC31A2O15432 143 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 TMEM127O75204 238 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 SCGNO76038 276 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 RGS11O94810 467 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 HIST1H1DP16402 221 aaKnown RBP7.06□□□□□ -1.28
SNX4-205ENST00000482965 MDKP21741 143 aaPredicted RBP7.06□□□□□ -1.28
SNX4-205ENST00000482965 PPP1CCP36873 323 aaKnown RBP7.06□□□□□ -1.28
SNX4-205ENST00000482965 RAB7AP51149 207 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 SCAND1P57086 179 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 VBP1P61758 197 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 NCS1P62166 190 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 HTD2P86397 168 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 RELBQ01201 579 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 ARFRP1Q13795 201 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 GNMTQ14749 295 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 ARL6IP1Q15041 203 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 Q6ZPA2 131 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 GPR141Q7Z602 305 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 TMEM219Q86XT9 240 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 C8orf31Q8N9H6 132 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 OR52L2PQ8NGH6 319 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 OR5H6Q8NGV6 325 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 PHF21AQ96BD5 680 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 BEX1Q9HBH7 125 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 Q9N2K0 584 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 RHBDL2Q9NX52 303 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 KCNK7Q9Y2U2 307 aa7.06□□□□□ -1.28
SNX4-205ENST00000482965 CLPSL1A2RUU4 121 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 HSD17B6O14756 317 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 TIMM23O14925 209 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 HSPA12AO43301 675 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 CHST1O43916 411 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 YPEL1O60688 119 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 GAPDHP04406 335 aaKnown RBP7.05□□□□□ -1.28
SNX4-205ENST00000482965 LPLP06858 475 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 CD24P25063 80 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 TALDO1P37837 337 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 RPS19P39019 145 aaKnown RBP7.05□□□□□ -1.28
SNX4-205ENST00000482965 ALDH3B2P48448 385 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 DIAPH2-AS1Q14236 149 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 CDNFQ49AH0 187 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 MORN2Q502X0 79 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 CT45A1Q5HYN5 189 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 GPR107Q5VW38 600 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 STEAP3Q658P3 488 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 CCBE1Q6UXH8 406 aaPredicted RBP7.05□□□□□ -1.28
SNX4-205ENST00000482965 Q6ZSV7 163 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 SLC25A48Q6ZT89 311 aaKnown RBP7.05□□□□□ -1.28
SNX4-205ENST00000482965 ANKRD13BQ86YJ7 626 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 OR8H3Q8N146 312 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 ZNF439Q8NDP4 499 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 OR4C13Q8NGP0 309 aa7.05□□□□□ -1.28
SNX4-205ENST00000482965 CT45A3Q8NHU0 189 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms