RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
CCM2-215ENST00000482714 TAS2R8Q9NYW2 309 aa12.53□□□□□ -0.4
CCM2-215ENST00000482714 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 ANK3Q12955 4377 aaKnown RBP12.52□□□□□ -0.41
CCM2-215ENST00000482714 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 IGHV1-69DA0A0B4J2H0 117 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 MEIOCA2RUB1 952 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 TOR1AO14656 332 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 IGHV1-69P01742 117 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 GSTT2P0CG29 244 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 GSTT2BP0CG30 244 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 PTHLHP12272 177 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 NFYBP25208 207 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 KLF17Q5JT82 389 aaPredicted RBP12.52□□□□□ -0.41
CCM2-215ENST00000482714 PRAMEF5Q5TYX0 476 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 ZNF626Q68DY1 528 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 HCP5Q6MZN7 132 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 C9orf139Q6ZV77 190 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 PRR18Q8N4B5 295 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 OR5AP2Q8NGF4 316 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 SMIM4Q8WVI0 70 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 EDARADDQ8WWZ3 215 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 S100ZQ8WXG8 99 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 CABLES2Q9BTV7 478 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 GNG12Q9UBI6 72 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 C2CD3Q4AC94 2353 aa12.52□□□□□ -0.41
CCM2-215ENST00000482714 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
CCM2-215ENST00000482714 RCVRNP35243 200 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 SRP14P37108 136 aaKnown RBP12.51□□□□□ -0.41
CCM2-215ENST00000482714 LGALS4P56470 323 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 TAS2R46P59540 309 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 ZNF782Q6ZMW2 699 aaPredicted RBP12.51□□□□□ -0.41
CCM2-215ENST00000482714 PNKDQ8N490 385 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 GDPD1Q8N9F7 314 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 OR52I2Q8NH67 350 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 OR10J5Q8NHC4 309 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 IL1F10Q8WWZ1 152 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 PSG11Q9UQ72 335 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
CCM2-215ENST00000482714 TBL2Q9Y4P3 447 aaKnown RBP12.51□□□□□ -0.41
CCM2-215ENST00000482714 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 V9GYH0 126 aa12.51□□□□□ -0.41
CCM2-215ENST00000482714 J3QR06 171 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 HSPA12AO43301 675 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 TBPP20226 339 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 GDNFP39905 211 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 ARPC4P59998 168 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 CHRFAM7AQ494W8 412 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 LYSMD2Q8IV50 215 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 GVQW1Q8N7I0 195 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 DEDD2Q8WXF8 326 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 SUCNR1Q9BXA5 334 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 NECAP2Q9NVZ3 263 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 KLK11Q9UBX7 282 aa12.5□□□□□ -0.41
CCM2-215ENST00000482714 IGKV1D-8A0A087WSZ0 117 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 TRAV40A0A0B4J280 105 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 NPFFO15130 113 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 HTR1DP28221 377 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 CEACAM6P40199 344 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 OR3A3P47888 321 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 RAB7AP51149 207 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 ACTBL2Q562R1 376 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 THAP7Q9BT49 309 aaPredicted RBP12.49□□□□□ -0.41
CCM2-215ENST00000482714 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
CCM2-215ENST00000482714 MMP28Q9H239 520 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 SLC23A1Q9UHI7 598 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 GAB2Q9UQC2 676 aa12.49□□□□□ -0.41
CCM2-215ENST00000482714 AMMECR1Q9Y4X0 333 aaPredicted RBP12.49□□□□□ -0.41
CCM2-215ENST00000482714 IGKV1-6A0A0C4DH72 117 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 ARG1P05089 322 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 IGHV4-38-2P0DP08 117 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 CEACAM3P40198 252 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 TAS2R19P59542 299 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 HERPUD1Q15011 391 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 CDK10Q15131 360 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 LTC4SQ16873 150 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 HLA-DRB5Q30154 266 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 PYDC2Q56P42 97 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 DHRS11Q6UWP2 260 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
CCM2-215ENST00000482714 OVCH2Q7RTZ1 564 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 Q8N402 240 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 TMEM229BQ8NBD8 167 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 GIMAP1Q8WWP7 306 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 MAFIPQ8WZ33 124 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 GCDHQ92947 438 aaPredicted RBP12.48□□□□□ -0.41
CCM2-215ENST00000482714 SNAPC3Q92966 411 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 GINS4Q9BRT9 223 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 DPM3Q9P2X0 92 aa12.48□□□□□ -0.41
CCM2-215ENST00000482714 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
CCM2-215ENST00000482714 LEUTXA8MZ59 168 aa12.47□□□□□ -0.41
CCM2-215ENST00000482714 OOSP1A8MZH6 123 aa12.47□□□□□ -0.41
CCM2-215ENST00000482714 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms