RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CD79AP11912 226 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 ZP3P21754 424 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 S100GP29377 79 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 FGF12P61328 243 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 HERV-K104P61576 105 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 GNG3P63215 75 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 PRDX4Q13162 271 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 TAF9Q16594 264 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 TBC1D28Q2M2D7 210 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 Q3ZCU0 254 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 HIST2H2BCQ6DN03 193 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 HIST2H2BDQ6DRA6 164 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 OR2A2Q6IF42 318 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 UQCC3Q6UW78 93 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 IGFL2Q6UWQ7 119 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 TFAP2EQ6VUC0 442 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 C17orf107Q6ZR85 190 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 FBXL14Q8N1E6 418 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 STPG2Q8N412 459 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 COMMD1Q8N668 190 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 CPEB3Q8NE35 698 aaKnown RBP6.54□□□□□ -1.36
SNX13-208ENST00000482558 BPIFCQ8NFQ6 507 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 OR10AD1Q8NGE0 317 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 OR1K1Q8NGR3 316 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 OR10K1Q8NGX5 313 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 FNDC9Q8TBE3 224 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 TMEM230Q96A57 120 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 POM121L2Q96KW2 1035 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 AQP10Q96PS8 301 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 ZNF2Q9BSG1 426 aaPredicted RBP6.54□□□□□ -1.36
SNX13-208ENST00000482558 PAPOLGQ9BWT3 736 aaKnown RBP6.54□□□□□ -1.36
SNX13-208ENST00000482558 ZNF471Q9BX82 626 aaPredicted RBP6.54□□□□□ -1.36
SNX13-208ENST00000482558 SHARPINQ9H0F6 387 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 SDHAF2Q9NX18 166 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 RASL12Q9NYN1 266 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 AK3Q9UIJ7 227 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 R4GN57 208 aa6.54□□□□□ -1.36
SNX13-208ENST00000482558 KMT2EQ8IZD2 1858 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 PRUNE2Q8WUY3 3088 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 IGKV1-27A0A075B6S5 117 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 TRBV6-6A0A0A6YYG2 114 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 DUXBA0A1W2PPF3 345 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 CD300LBA8K4G0 201 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 PRYO14603 147 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 CRYZL1O95825 349 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 CD1BP29016 333 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 MDH2P40926 338 aaKnown RBP6.53□□□□□ -1.36
SNX13-208ENST00000482558 TNFSF10P50591 281 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 RND3P61587 244 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 SUPT4H1P63272 117 aaKnown RBP6.53□□□□□ -1.36
SNX13-208ENST00000482558 EIF2S3LQ2VIR3 472 aaKnown RBP6.53□□□□□ -1.36
SNX13-208ENST00000482558 SIGIRRQ6IA17 410 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 PQLC2Q6ZP29 291 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 Q6ZRM9 215 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 P4HA3Q7Z4N8 544 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 LGI3Q8N145 548 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 SUMF1Q8NBK3 374 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 SLC30A7Q8NEW0 376 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 OR4A16Q8NH70 328 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 DCUN1D4Q92564 292 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 SARAFQ96BY9 339 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 ABHD14BQ96IU4 210 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 FAAP24Q9BTP7 215 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 ZNF442Q9H7R0 627 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 NAA60Q9H7X0 242 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 TREM2Q9NZC2 230 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 RCC2Q9P258 522 aaKnown RBP6.53□□□□□ -1.36
SNX13-208ENST00000482558 MBD2Q9UBB5 411 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 OR14J1Q9UGF5 321 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 POLDIP2Q9Y2S7 368 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 STARD10Q9Y365 291 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 TMED3Q9Y3Q3 217 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 CSAG2Q9Y5P2 127 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 KNTC1P50748 2209 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 EYSQ5T1H1 3165 aa6.53□□□□□ -1.36
SNX13-208ENST00000482558 NCOR1O75376 2440 aa6.52□□□□□ -1.36
SNX13-208ENST00000482558 A0A087X0K7 114 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 RAB19A4D1S5 217 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 ARGFXA6NJG6 315 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 A8MXK9 166 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 SDCBPO00560 298 aaPredicted RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 GEMIN2O14893 280 aaKnown RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 ANGPTL7O43827 346 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 OR7C1O76099 320 aaPredicted RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 F10P00742 488 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 HLA-HP01893 362 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 GAPDHP04406 335 aaKnown RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 FGF2P09038 288 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 ACAA1P09110 424 aaPredicted RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 PATE4P0C8F1 98 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 SRD5A1P18405 259 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 ANOS1P23352 680 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 GLRA1P23415 457 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 APOBEC3AP31941 199 aaPredicted RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 FCGR2BP31994 310 aaPredicted RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 PLA2G5P39877 138 aa6.52□□□□□ -1.37
SNX13-208ENST00000482558 CDX1P47902 265 aaPredicted RBP6.52□□□□□ -1.37
SNX13-208ENST00000482558 UBE2NP61088 152 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms