RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NXNL2Q5VZ03 156 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 ELP2Q6IA86 826 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 LAIR2Q6ISS4 152 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 CLEC20AQ6ZU45 233 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 GID4Q8IVV7 300 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 CCDC112Q8NEF3 446 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 BPIFB6Q8NFQ5 453 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 OR8K1Q8NGG5 319 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 RNF133Q8WVZ7 376 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 SLC25A44Q96H78 314 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-210ENST00000482158 MBOAT7Q96N66 472 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 ZNF426Q9BUY5 554 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 OR2D2Q9H210 308 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 USE1Q9NZ43 259 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 OR5V1Q9UGF6 321 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 MCTS1Q9ULC4 181 aaKnown RBP2.48□□□□□ -2.01
SF3B1-210ENST00000482158 ARAP3Q8WWN8 1544 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 IGHV1-45A0A0A0MS14 117 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 A0A1B0GTI1 187 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 SYNGR2O43760 224 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 DEXIO95424 95 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 PDYNP01213 254 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 RPS17P08708 135 aaKnown RBP2.47□□□□□ -2.01
SF3B1-210ENST00000482158 CBR1P16152 277 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 COILP38432 576 aaPredicted RBP2.47□□□□□ -2.01
SF3B1-210ENST00000482158 NKX2-5P52952 324 aaPredicted RBP2.47□□□□□ -2.01
SF3B1-210ENST00000482158 AQP5P55064 265 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 CD164Q04900 197 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 PRDX1Q06830 199 aaKnown RBP2.47□□□□□ -2.01
SF3B1-210ENST00000482158 TRIP13Q15645 432 aaPredicted RBP2.47□□□□□ -2.01
SF3B1-210ENST00000482158 SPOPLQ6IQ16 392 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 SLC51BQ86UW2 128 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 LRP11Q86VZ4 500 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 TMEM25Q86YD3 366 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 C10orf67Q8IYJ2 551 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 GATD1Q8NB37 220 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 OR5P3Q8WZ94 311 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 CGREF1Q99674 301 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 B9D2Q9BPU9 175 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 DCUN1D5Q9BTE7 237 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 HRASLSQ9HDD0 168 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 SLC22A13Q9Y226 551 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 USH1CQ9Y6N9 552 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 V9GYQ6 96 aa2.47□□□□□ -2.01
SF3B1-210ENST00000482158 A0A1W2PNM2 257 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 A0A1W2PQL4 384 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-210ENST00000482158 GOLGA6L10A6NI86 522 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 E7EQL1 145 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 SGCEO43556 437 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 PSMG1O95456 288 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 IFNA5P01569 189 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 PET100P0DJ07 73 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 S100A2P29034 98 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 RAB4BP61018 213 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 OR4D1Q15615 310 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 TMEM249Q2WGJ8 235 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 SLC36A2Q495M3 483 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 LAMTOR1Q6IAA8 161 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 HS3ST5Q8IZT8 346 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 SLC25A45Q8N413 288 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 C2orf73Q8N5S3 287 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-210ENST00000482158 ZNF738Q8NE65 137 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 PRRT1Q99946 306 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 APOL4Q9BPW4 351 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 BCL2L14Q9BZR8 327 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 C6orf62Q9GZU0 229 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-210ENST00000482158 C19orf12Q9NSK7 152 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 PLEKHJ1Q9NW61 149 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 FBXL3Q9UKT7 428 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 SNX24Q9Y343 169 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 MMACHCQ9Y4U1 282 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 VIRMAQ69YN4 1812 aaKnown RBP2.46□□□□□ -2.02
SF3B1-210ENST00000482158 MYO15BQ96JP2 1530 aa2.46□□□□□ -2.02
SF3B1-210ENST00000482158 USP42Q9H9J4 1324 aaKnown RBP2.45□□□□□ -2.02
SF3B1-210ENST00000482158 A6NED7 52 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 FAM183AA6NL82 134 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 TMEM250H0YL14 139 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 C3orf84H3BNL1 204 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 POP7O75817 140 aaKnown RBP2.45□□□□□ -2.02
SF3B1-210ENST00000482158 TNFAIP8O95379 198 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 OCM2P0CE71 109 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 RPA3P35244 121 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-210ENST00000482158 RAB25P57735 213 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 OR10A3P58181 314 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 SPCS3P61009 180 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 LSM6P62312 80 aaKnown RBP2.45□□□□□ -2.02
SF3B1-210ENST00000482158 TPBGQ13641 420 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 TMED2Q15363 201 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 FAM183BPQ6ZVS7 135 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 AHSA2Q719I0 299 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 Q8N402 240 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 PYDC1Q8WXC3 89 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 CMTM5Q96DZ9 223 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 REEP6Q96HR9 211 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 PRAP1Q96NZ9 151 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 C1orf109Q9NX04 203 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 TAS2R13Q9NYV9 303 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 STOML2Q9UJZ1 356 aa2.45□□□□□ -2.02
SF3B1-210ENST00000482158 BTRCQ9Y297 605 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms