RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 PF4V1P10720 104 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 CHATP28329 748 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 RPS25P62851 125 aaKnown RBP14.01□□□□□ -0.17
COL9A3-212ENST00000481800 MLLT11Q13015 90 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-212ENST00000481800 KHDC1LQ5JSQ8 128 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF554Q86TJ5 538 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 TGIF2LXQ8IUE1 241 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 OR2T10Q8NGZ9 312 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 EAF1Q96JC9 268 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-212ENST00000481800 FAAP24Q9BTP7 215 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 MBNL3Q9NUK0 354 aaKnown RBP14.01□□□□□ -0.17
COL9A3-212ENST00000481800 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 LRRC42Q9Y546 428 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 PSMB11A5LHX3 300 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 SERPINE3A8MV23 424 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 CPEP16870 476 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 CD1BP29016 333 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 MAP2K4P45985 399 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 EBI3Q14213 229 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 CT45A1Q5HYN5 189 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 STEAP3Q658P3 488 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 TMEM91Q6ZNR0 172 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 C6orf201Q7Z4U5 140 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 IZUMO1Q8IYV9 350 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF439Q8NDP4 499 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 CT45A3Q8NHU0 189 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 MRPL30Q8TCC3 161 aaKnown RBP14□□□□□ -0.17
COL9A3-212ENST00000481800 ST6GALNAC6Q969X2 333 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 MGLLQ99685 303 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 SULT4A1Q9BR01 284 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 URM1Q9BTM9 101 aaKnown RBP14□□□□□ -0.17
COL9A3-212ENST00000481800 TM2D1Q9BX74 207 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 CHMP1AQ9HD42 196 aaPredicted RBP14□□□□□ -0.17
COL9A3-212ENST00000481800 ABRACLQ9P1F3 81 aa14□□□□□ -0.17
COL9A3-212ENST00000481800 VWFP04275 2813 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 TMEM14DPA8MWL7 114 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 RGS11O94810 467 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 MOSP00540 346 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 ARSBP15848 533 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 BLVRBP30043 206 aaPredicted RBP13.99□□□□□ -0.17
COL9A3-212ENST00000481800 RANBP1P43487 201 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF134P52741 427 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 UNC119Q13432 240 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 MORN2Q502X0 79 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 TCTEX1D4Q5JR98 221 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 SLC35E3Q7Z769 313 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 OR52L2PQ8NGH6 319 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 CHPT1Q8WUD6 406 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 GALMQ96C23 342 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 NICN1Q9BSH3 213 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 KCNK15Q9H427 330 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 PLEKHJ1Q9NW61 149 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 JPT1Q9UK76 154 aa13.99□□□□□ -0.17
COL9A3-212ENST00000481800 AK6Q9Y3D8 172 aaKnown RBP13.99□□□□□ -0.17
COL9A3-212ENST00000481800 SLC17A2O00624 439 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 PF4P02776 101 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 CD37P11049 281 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 CALRP27797 417 aaKnown RBP13.98□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF137PP52743 207 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 HTD2P86397 168 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 P2RY14Q15391 338 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 RAB11BQ15907 218 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 SAMD5Q5TGI4 173 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 C10orf99Q6UWK7 81 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 OR2W3Q7Z3T1 314 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF329Q86UD4 541 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 FOXRED2Q8IWF2 684 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 SETD6Q8TBK2 473 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 CYYR1Q96J86 154 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 ACOT13Q9NPJ3 140 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 RAB26Q9ULW5 256 aa13.98□□□□□ -0.17
COL9A3-212ENST00000481800 CD33P20138 364 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 PPP1CCP36873 323 aaKnown RBP13.97□□□□□ -0.17
COL9A3-212ENST00000481800 SLC35B1P78383 322 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 QRFPP83859 136 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 FABP5Q01469 135 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 GNMTQ14749 295 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 BEAN1Q3B7T3 259 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF367Q7RTV3 350 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 OR8H1Q8NGG4 311 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 IL1F10Q8WWZ1 152 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 NOL4LQ96MY1 436 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-212ENST00000481800 RASL11BQ9BPW5 248 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 ABHD14AQ9BUJ0 271 aa13.97□□□□□ -0.17
COL9A3-212ENST00000481800 ZNF736B4DX44 427 aaPredicted RBP13.96□□□□□ -0.17
COL9A3-212ENST00000481800 LANCL1O43813 399 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 YPEL1O60688 119 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 IGHG2P01859 326 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 PSMD7P51665 324 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 TBCEQ15813 527 aaPredicted RBP13.96□□□□□ -0.17
COL9A3-212ENST00000481800 OXLD1Q5BKU9 147 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 C5orf24Q7Z6I8 188 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 Q8N6K4 173 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 YPEL2Q96QA6 119 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 GFI1Q99684 422 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 LPAR5Q9H1C0 372 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 RIMS4Q9H426 269 aaPredicted RBP13.96□□□□□ -0.17
COL9A3-212ENST00000481800 LIN7CQ9NUP9 197 aaKnown RBP13.96□□□□□ -0.17
COL9A3-212ENST00000481800 STEAP1Q9UHE8 339 aa13.96□□□□□ -0.17
COL9A3-212ENST00000481800 LINC00527Q9UJ94 153 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms