RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 DOPEY2Q9Y3R5 2298 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 IGHV4-30-2A0A087WSY4 118 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 GJE1A6NN92 205 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 EFCAB9A8MZ26 197 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 SMIM1B2RUZ4 78 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 DISC1C4P0D8 188 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 HCRTO43612 131 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 PRKACGP22612 351 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 RIDAP52758 137 aaKnown RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 PSPHP78330 225 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 SLC10A7Q0GE19 358 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 PXDC1Q5TGL8 231 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 TMEM205Q6UW68 189 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 SMIM20Q8N5G0 67 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 FAM71E2Q8N5Q1 922 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 NKAPP1Q8N9T2 125 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 OR10G3Q8NGC4 313 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 OR4K17Q8NGC6 315 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 FAM172AQ8WUF8 416 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 STMN2Q93045 179 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 FMC1Q96HJ9 113 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 BTN2A3PQ96KV6 586 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 OR2V2Q96R30 315 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 CACNG5Q9UF02 275 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 PRRC2AP48634 2157 aaKnown RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 FAT1Q14517 4588 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 TRAV9-2A0A087WT02 112 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 ARPC5O15511 151 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 MGRN1O60291 552 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 MOSP00540 346 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 PRB1P04280 392 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 CD1EP15812 388 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 CELP19835 753 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 RWDD2BP57060 319 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 MICAQ29983 383 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 ANKRD22Q5VYY1 191 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 PLET1Q6UQ28 207 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 CHMP1BQ7LBR1 199 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 COMMD7Q86VX2 200 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 LINC00301Q8NCQ3 95 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 DOK4Q8TEW6 326 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 FCRL1Q96LA6 429 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 DUX3Q96PT4 197 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 KCTD14Q9BQ13 255 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 C1QTNF4Q9BXJ3 329 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 PCBD2Q9H0N5 130 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 WFDC1Q9HC57 220 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 SLCO1B3Q9NPD5 702 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 RBM22Q9NW64 420 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMC6-208ENST00000481708 RWDD2AQ9UIY3 292 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 SLC7A11Q9UPY5 501 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 F5P12259 2224 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 EPM2AB3EWF7 344 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 HAND1O96004 215 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 ALOX5APP20292 161 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 S100A7P31151 101 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 SPRP35270 261 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 SYT6Q5T7P8 510 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 C19orf48Q6RUI8 117 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 FBXW12Q6X9E4 464 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 LRRC29Q8WV35 223 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 BIRC8Q96P09 236 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 C12orf10Q9HB07 376 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 RRAGDQ9NQL2 400 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 FBXO6Q9NRD1 293 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 FGFR1OP2Q9NVK5 253 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 TAS2R5Q9NYW4 299 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 TREM2Q9NZC2 230 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 DEC1Q9P2X7 70 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 FBXO5Q9UKT4 447 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 KNL1Q8NG31 2342 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 IGHV3-35A0A0C4DH35 117 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 CRYAAP02489 173 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 POLR2IP36954 125 aaKnown RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 RPL5P46777 297 aaKnown RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 LGALS7P47929 136 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 PRDX1Q06830 199 aaKnown RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 SNRNP35Q16560 246 aaKnown RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 C11orf71Q6IPW1 123 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 ZNF571Q7Z3V5 609 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 PIM3Q86V86 326 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 OR10G9Q8NGN4 311 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 STOML3Q8TAV4 291 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 CCL17Q92583 94 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 ZNF501Q96CX3 271 aaPredicted RBP2.45□□□□□ -2.02
SMC6-208ENST00000481708 DDIT4LQ96D03 193 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 KCNE3Q9Y6H6 103 aa2.45□□□□□ -2.02
SMC6-208ENST00000481708 KLLNB2CW77 178 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 ANGPTL7O43827 346 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 WISP3O95389 354 aaPredicted RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 RLN2P04090 185 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 NTSP30990 170 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 AP1S2P56377 157 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 ERVK-16P61578 105 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 SRPXP78539 464 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 KIAA0087Q14695 138 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 SLC25A35Q3KQZ1 300 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 TTLL9Q3SXZ7 439 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 CHRFAM7AQ494W8 412 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms