RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 UBBP0CG47 229 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 HSMCR30P0CW71 290 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 PPP1CCP36873 323 aaKnown RBP5.59□□□□□ -1.51
COL17A1-205ENST00000480127 ECI1P42126 302 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 THBS3P49746 956 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 WNT4P56705 351 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 CBX3Q13185 183 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 MED22Q15528 200 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 ECSCRQ19T08 205 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 NHLRC3Q5JS37 347 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 C6orf141Q5SZD1 244 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 C9orf66Q5T8R8 295 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 ETV3LQ6ZN32 361 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 IZUMO1Q8IYV9 350 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 PACRGLQ8N7B6 248 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 OR1L1Q8NH94 360 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 OR5B12Q96R08 314 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 S1PR3Q99500 378 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 MND1Q9BWT6 205 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 TMEM59Q9BXS4 323 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 CCDC90BQ9GZT6 254 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 IFT22Q9H7X7 185 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 TAF9BQ9HBM6 251 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 MRPS18AQ9NVS2 196 aaKnown RBP5.59□□□□□ -1.51
COL17A1-205ENST00000480127 PLEKHJ1Q9NW61 149 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF581Q9P0T4 197 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 CLEC2DQ9UHP7 191 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 RYR2Q92736 4967 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 TRAV8-7A0A075B6U6 113 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 MAGEA13PA6NCF6 341 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 OGG1O15527 345 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 RAMP3O60896 148 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 IGHG2P01859 326 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 AMY1AP04745 511 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 AMY2AP04746 511 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 GLAP06280 429 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 ELANEP08246 267 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 RCC1P18754 421 aaPredicted RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 FSTP19883 344 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 VHLP40337 213 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 RANBP1P43487 201 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 LUMP51884 338 aaPredicted RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 FOXE3Q13461 319 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF260Q3ZCT1 412 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 Q3ZCU0 254 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 HSD17B12Q53GQ0 312 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 UTF1Q5T230 341 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 FAM27D1Q5T7N8 215 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF529Q6P280 563 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 SLC25A48Q6ZT89 311 aaKnown RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 C18orf65Q6ZTR6 163 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 OR52L2PQ8NGH6 319 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 GGHQ92820 318 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 DERL3Q96Q80 235 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 UQCC2Q9BRT2 126 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 URM1Q9BTM9 101 aaKnown RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 ABCG5Q9H222 651 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF355PQ9NSJ1 428 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 CNOT2Q9NZN8 540 aaKnown RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 GHRLQ9UBU3 117 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 RNF150Q9ULK6 438 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 LSM4Q9Y4Z0 139 aaKnown RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 LRRC42Q9Y546 428 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 RBM7Q9Y580 266 aaKnown RBP5.58□□□□□ -1.52
COL17A1-205ENST00000480127 WSB1Q9Y6I7 421 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 TENM2Q9NT68 2774 aa5.58□□□□□ -1.52
COL17A1-205ENST00000480127 TRBV5-5A0A0J9YX44 114 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A10PA6NDY2 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A18PA6NE21 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A16PA6NEW6 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A20PA6NIJ5 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A7PA6NKC0 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A9PA6NNJ1 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A12PA8MX19 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A5PA8MXJ8 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A23PA8MXZ1 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 ZNF736B4DX44 427 aaPredicted RBP5.57□□□□□ -1.52
COL17A1-205ENST00000480127 H0YHG0 523 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 C15orf65H3BRN8 121 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 SLC31A2O15432 143 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 LANCL1O43813 399 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 SAP30O75446 220 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 CNIH1O95406 144 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 OR8U8P0C7N1 319 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A15PP0C7V4 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A13PP0C7W8 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A14PP0C7W9 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 FAM90A24PP0C7X0 464 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 BLVRBP30043 206 aaPredicted RBP5.57□□□□□ -1.52
COL17A1-205ENST00000480127 ACTBP60709 375 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 PAX5Q02548 391 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 TMEM267Q0VDI3 215 aaPredicted RBP5.57□□□□□ -1.52
COL17A1-205ENST00000480127 ACSM3Q53FZ2 586 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 CASC10Q5T4H9 136 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 DMKNQ6E0U4 476 aaPredicted RBP5.57□□□□□ -1.52
COL17A1-205ENST00000480127 LIN54Q6MZP7 749 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 ASCL4Q6XD76 172 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 MOB1BQ7L9L4 216 aa5.57□□□□□ -1.52
COL17A1-205ENST00000480127 CEACAM19Q7Z692 300 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms