RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 C16orf45Q96MC5 204 aaPredicted RBP8.62□□□□□ -1.03
USP11-208ENST00000480104 TMEM109Q9BVC6 243 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 SCRT1Q9BWW7 348 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 CMC2Q9NRP2 79 aa8.62□□□□□ -1.03
USP11-208ENST00000480104 APOL3O95236 402 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 CA2P00918 260 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 IFNA21P01568 189 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 IFNA17P01571 189 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 NCK1P16333 377 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 CCL1P22362 96 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 RIDAP52758 137 aaKnown RBP8.61□□□□□ -1.03
USP11-208ENST00000480104 XGP55808 180 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 PAX5Q02548 391 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 MED22Q15528 200 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 BTNL8Q6UX41 500 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 ZNF562Q6V9R5 426 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 OR2T33Q8NG76 320 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 OR10V1Q8NGI7 309 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 MOB1AQ9H8S9 216 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 ARMC1Q9NVT9 282 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 OR52A1Q9UKL2 312 aa8.61□□□□□ -1.03
USP11-208ENST00000480104 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 SOX14O95416 240 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 SCTP09683 121 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 SMIM11AP58511 58 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 ROM1Q03395 351 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 ODF4Q2M2E3 257 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 Q3ZCU0 254 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 PLEKHG7Q6ZR37 379 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 ZNF679Q8IYX0 411 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 OR9Q2Q8NGE9 314 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 OR5D18Q8NGL1 313 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 KCNG3Q8TAE7 436 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 THRSPQ92748 146 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 USMG5Q96IX5 58 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 IKZF2Q9UKS7 526 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 BAIAP2Q9UQB8 552 aa8.6□□□□□ -1.03
USP11-208ENST00000480104 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 TMEM213A2RRL7 107 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 MRASO14807 208 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 GSTA4O15217 222 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 ZNF254O75437 659 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 HLA-AP01891 365 aaKnown RBP8.59□□□□□ -1.03
USP11-208ENST00000480104 GZMHP20718 246 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 OR3A3P47888 321 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 EXOSC2Q13868 293 aaKnown RBP8.59□□□□□ -1.03
USP11-208ENST00000480104 FAM131AQ6UXB0 335 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 RASSF6Q6ZTQ3 369 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 SLC38A6Q8IZM9 456 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 OR2C3Q8N628 320 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 Q8NAQ8 132 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 OR5B3Q8NH48 314 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 FAM162AQ96A26 154 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 GALNT14Q96FL9 552 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 BTBD10Q9BSF8 475 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 CHRDL1Q9BU40 450 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 GNG12Q9UBI6 72 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 R4GMQ9 66 aa8.59□□□□□ -1.03
USP11-208ENST00000480104 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
USP11-208ENST00000480104 SERPINA3P01011 423 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 FXYD3Q14802 87 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 C6orf223Q8N319 242 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 UXS1Q8NBZ7 420 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 OR13C5Q8NGS8 318 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 CNIH3Q8TBE1 160 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 C7orf26Q96N11 449 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 NR1H4Q96RI1 486 aaPredicted RBP8.58□□□□□ -1.04
USP11-208ENST00000480104 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 CMTM6Q9NX76 183 aa8.58□□□□□ -1.04
USP11-208ENST00000480104 METTL1Q9UBP6 276 aaKnown RBP8.58□□□□□ -1.04
USP11-208ENST00000480104 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 PPP5D1E7EU14 171 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 MAGEB4O15481 346 aaPredicted RBP8.57□□□□□ -1.04
USP11-208ENST00000480104 SYT7O43581 403 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 HTR3BO95264 441 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 KCNJ3P48549 501 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 TNFAIP8L3Q5GJ75 292 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 RBPMS2Q6ZRY4 209 aaKnown RBP8.57□□□□□ -1.04
USP11-208ENST00000480104 ODF3L1Q8IXM7 274 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 IQCF1Q8N6M8 205 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 CD300LFQ8TDQ1 290 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 CCDC107Q8WV48 283 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 YIPF3Q9GZM5 350 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 RHOFQ9HBH0 211 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 NEK6Q9HC98 313 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 IL1RAPQ9NPH3 570 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 COA4Q9NYJ1 87 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 ZNF230Q9UIE0 474 aaPredicted RBP8.57□□□□□ -1.04
USP11-208ENST00000480104 FAT3Q8TDW7 4589 aa8.57□□□□□ -1.04
USP11-208ENST00000480104 TRAV25A0A0B4J276 109 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 IGHV4-28A0A0C4DH34 117 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 TMEM30CPA0ZSE6 113 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 NPPAP01160 153 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
USP11-208ENST00000480104 MRPL3P09001 348 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms