RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 IGKV1D-33P01593 117 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 IGKV1-33P01594 117 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 MEF2BQ02080 365 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-208ENST00000479733 TNFRSF9Q07011 255 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 C9orf135Q5VTT2 229 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 SLC23A3Q6PIS1 610 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 ZNF488Q96MN9 340 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 P2RX4Q99571 388 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 HIPK2Q9H2X6 1198 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 PPP1R3CQ9UQK1 317 aa17.68■□□□□ 0.42
COL13A1-208ENST00000479733 FAM186AA6NE01 2351 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 OR6C6A6NF89 314 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 CD300LBA8K4G0 201 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 IFNA1P01562 189 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 RPS16P62249 146 aaKnown RBP17.67■□□□□ 0.42
COL13A1-208ENST00000479733 TEX38Q6PEX7 206 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 OR2H1Q9GZK4 316 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 DUXBA0A1W2PPF3 345 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 TUSC2O75896 110 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 NAPSAO96009 420 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 GCGP01275 180 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 YRDCQ86U90 279 aaKnown RBP17.67■□□□□ 0.42
COL13A1-208ENST00000479733 RPP25LQ8N5L8 163 aaKnown RBP17.67■□□□□ 0.42
COL13A1-208ENST00000479733 OR56B2PQ8NGI1 322 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 OR4F5Q8NH21 305 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 OR4F4Q96R69 305 aa17.67■□□□□ 0.42
COL13A1-208ENST00000479733 A0A1B0GUS0 222 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 C2CD4DB7Z1M9 353 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 CST2P09228 141 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 FKBP2P26885 142 aaKnown RBP17.66■□□□□ 0.42
COL13A1-208ENST00000479733 FAM3BP58499 235 aaPredicted RBP17.66■□□□□ 0.42
COL13A1-208ENST00000479733 HLA-BQ31612 363 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 ZDHHC23Q8IYP9 409 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 DNASE2BQ8WZ79 361 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 FOXB1Q99853 325 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 DKK1O94907 266 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 BMP5P22003 454 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 TMEM41BQ5BJD5 291 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 CYP2G1PQ6ZSU1 146 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 AAED1Q7RTV5 226 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 MRPL30Q8TCC3 161 aaKnown RBP17.66■□□□□ 0.42
COL13A1-208ENST00000479733 ADGRG7Q96K78 797 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 PARLQ9H300 379 aa17.66■□□□□ 0.42
COL13A1-208ENST00000479733 RBM7Q9Y580 266 aaKnown RBP17.66■□□□□ 0.42
COL13A1-208ENST00000479733 DEFA4P12838 97 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 LRRC75BQ2VPJ9 315 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 CARFQ8N187 725 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 BEND2Q8NDZ0 799 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 TMEM18Q96B42 140 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 FGF5P12034 268 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 LIFP15018 202 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 CHRNA7P36544 502 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 CEACAM6P40199 344 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 SYT13Q7L8C5 426 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 SGCZQ96LD1 299 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 FGF23Q9GZV9 251 aaPredicted RBP17.65■□□□□ 0.42
COL13A1-208ENST00000479733 ATP23Q9Y6H3 246 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 DOCK11Q5JSL3 2073 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 KIR2DS1A0A191URI9 304 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 KBTBD11O94819 623 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 IGKV1-39P01597 117 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 IGKV1D-39P04432 117 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 S100GP29377 79 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 KIR2DS4P43632 304 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 KIR2DS1Q14954 304 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 PCSK4Q6UW60 755 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.65■□□□□ 0.42
COL13A1-208ENST00000479733 OR10J5Q8NHC4 309 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 OR51I2Q9H344 312 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 MTCH1Q9NZJ7 389 aa17.65■□□□□ 0.42
COL13A1-208ENST00000479733 KMT5CQ86Y97 462 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 TMEM68Q96MH6 324 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 WDR61Q9GZS3 305 aaKnown RBP17.64■□□□□ 0.41
COL13A1-208ENST00000479733 OR1A1Q9P1Q5 309 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 RARRES3Q9UL19 164 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 HBG1P69891 147 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 HBG2P69892 147 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 PMP22Q01453 160 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 WDR74Q6RFH5 385 aaPredicted RBP17.64■□□□□ 0.41
COL13A1-208ENST00000479733 CPEB3Q8NE35 698 aaKnown RBP17.64■□□□□ 0.41
COL13A1-208ENST00000479733 OR10V1Q8NGI7 309 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 TMEM170AQ8WVE7 144 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 PYGO2Q9BRQ0 406 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 SEMA5BQ9P283 1151 aa17.64■□□□□ 0.41
COL13A1-208ENST00000479733 CD33P20138 364 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 DSCR4P56555 118 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-208ENST00000479733 PRDX4Q13162 271 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 OR2T10Q8NGZ9 312 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 RNF150Q9ULK6 438 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 SYNGR1O43759 233 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 CXCL13O43927 109 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 HRASP01112 189 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 COX5BP10606 129 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 ZNF25P17030 456 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-208ENST00000479733 BTF3P20290 206 aaKnown RBP17.63■□□□□ 0.41
COL13A1-208ENST00000479733 PSMB3P49720 205 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 SERF2P84101 59 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 TAF15Q92804 592 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL13A1-208ENST00000479733 CLDN23Q96B33 292 aa17.63■□□□□ 0.41
COL13A1-208ENST00000479733 PSMG3Q9BT73 122 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms