RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NIT2Q9NQR4 276 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 OR14J1Q9UGF5 321 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 RNF150Q9ULK6 438 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 STRAPQ9Y3F4 350 aaKnown RBP9.16□□□□□ -0.94
VPS52-217ENST00000478934 OR2W1Q9Y3N9 320 aa9.16□□□□□ -0.94
VPS52-217ENST00000478934 RP1L1Q8IWN7 2480 aaPredicted RBP9.15□□□□□ -0.94
VPS52-217ENST00000478934 TNRC6AQ8NDV7 1962 aaKnown RBP9.15□□□□□ -0.94
VPS52-217ENST00000478934 H3BQ15 152 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 WNT9BO14905 357 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 PITX3O75364 302 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 YIF1AO95070 293 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 OR2H2O95918 312 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 FOLR2P14207 255 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 AGAP20933 346 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 VDAC1P21796 283 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
VPS52-217ENST00000478934 ZNF266Q14584 549 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 TESK1Q15569 626 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 RAB39BQ96DA2 213 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 IFT22Q9H7X7 185 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 KLF13Q9Y2Y9 288 aaPredicted RBP9.15□□□□□ -0.94
VPS52-217ENST00000478934 RNF115Q9Y4L5 304 aa9.15□□□□□ -0.94
VPS52-217ENST00000478934 OR8U8P0C7N1 319 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 MPV17P39210 176 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 LINC00205P59089 165 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 RPS16P62249 146 aaKnown RBP9.15□□□□□ -0.95
VPS52-217ENST00000478934 HLA-DRB3P79483 266 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 OR2B11Q5JQS5 317 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 SLC25A24Q6NUK1 477 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 H1FOOQ8IZA3 346 aaPredicted RBP9.15□□□□□ -0.95
VPS52-217ENST00000478934 FAM185AQ8N0U4 392 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 ZNF561Q8N587 486 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 OR1J1Q8NGS3 322 aa9.15□□□□□ -0.95
VPS52-217ENST00000478934 WDR1O75083 606 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 METTL15P1P0C7V9 234 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CD46P15529 392 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 IGHV1-2P23083 117 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CCL11P51671 97 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 IL24Q13007 206 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 HMGN3Q15651 99 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 SLC25A40Q8TBP6 338 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 TINAGQ9UJW2 476 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 KCNS2Q9ULS6 477 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 RBM7Q9Y580 266 aaKnown RBP9.14□□□□□ -0.95
VPS52-217ENST00000478934 MPC1Q9Y5U8 109 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CACNA1GO43497 2377 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 TRBV23-1A0A0A0MS06 115 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 ZFP92A6NM28 416 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 KIAA1324LA8MWY0 1029 aaPredicted RBP9.14□□□□□ -0.95
VPS52-217ENST00000478934 PRSS44E7EML9 344 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 H0Y980 276 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 UBE2CO00762 179 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 HSPA12AO43301 675 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 SMPD2O60906 423 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CLN5O75503 358 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 IFNA4P05014 189 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 SERPINE2P07093 398 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CXCL1P09341 107 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 TAGLN2P37802 199 aaKnown RBP9.14□□□□□ -0.95
VPS52-217ENST00000478934 RAB5CP51148 216 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 SOX8P57073 446 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CTAG1AP78358 180 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 SRPXP78539 464 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 ARL16Q0P5N6 197 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 ICAM4Q14773 271 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 LCN15Q6UWW0 184 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 SSX7Q7RTT5 188 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 GNG13Q9P2W3 67 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 CACNG5Q9UF02 275 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 TRAPPC2LQ9UL33 140 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 ICE1Q9Y2F5 2266 aa9.14□□□□□ -0.95
VPS52-217ENST00000478934 OR5B21A6NL26 309 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
VPS52-217ENST00000478934 PSPNO60542 156 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 IGKV1-5P01602 117 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 PPP1CBP62140 327 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 DLK1P80370 383 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 PSG7Q13046 419 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 AKR1C8PQ5T2L2 129 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 ALKBH2Q6NS38 261 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 COMMD1Q8N668 190 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 TPRX1Q8N7U7 411 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 CNEP1R1Q8N9A8 125 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 OR10V1Q8NGI7 309 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 OR5D13Q8NGL4 314 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 SLC25A31Q9H0C2 315 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 J3QT63 122 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 SRP19P09132 144 aaKnown RBP9.13□□□□□ -0.95
VPS52-217ENST00000478934 WT1P19544 449 aaPredicted RBP9.13□□□□□ -0.95
VPS52-217ENST00000478934 CEACAM6P40199 344 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 ERVFRD-1P60508 538 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 UBE2KP61086 200 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 B2MP61769 119 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 RPL23AP62750 156 aaKnown RBP9.13□□□□□ -0.95
VPS52-217ENST00000478934 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms