RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ERGIC3Q9Y282 383 aa7.47□□□□□ -1.21
CCM2-210ENST00000478169 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
CCM2-210ENST00000478169 IGHV7-81A0A0B4J1V7 117 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 MAGEA13PA6NCF6 341 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 TRIM64CA6NLI5 447 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 A8MZ25 164 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 E9PI62 339 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 LINC01619G3V211 115 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 FADS2O95864 444 aaKnown RBP7.46□□□□□ -1.22
CCM2-210ENST00000478169 CD2P06729 351 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 OR8U9P0C7N5 309 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 GTF2F2P13984 249 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 SERPINA2P20848 420 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 MYF6P23409 242 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 ZNF93P35789 620 aaPredicted RBP7.46□□□□□ -1.22
CCM2-210ENST00000478169 GBX2P52951 348 aaPredicted RBP7.46□□□□□ -1.22
CCM2-210ENST00000478169 ACTBP60709 375 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 C6orf183Q5T699 404 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 ZFAND6Q6FIF0 208 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 TRAT1Q6PIZ9 186 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 GPR148Q8TDV2 347 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 ZNF251Q9BRH9 671 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 TOLLIPQ9H0E2 274 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 EDA2RQ9HAV5 297 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 ERVK13-1Q9NX77 482 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 NKX1-2Q9UD57 310 aaPredicted RBP7.46□□□□□ -1.22
CCM2-210ENST00000478169 TRAPPC2LQ9UL33 140 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 GMPPBQ9Y5P6 360 aa7.46□□□□□ -1.22
CCM2-210ENST00000478169 MCRIP1C9JLW8 97 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 ARPC1BO15143 372 aaKnown RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 NBR2O15453 112 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 CA11O75493 328 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 ATP5HO75947 161 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 HBZP02008 142 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 BDKRB2P30411 391 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 SOX2P48431 317 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 VEGFCP49767 419 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 SLURP1P55000 103 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 PPP3R1P63098 170 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 GPR176Q14439 515 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 C5orf64Q2M2E5 130 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 CCDC58Q4VC31 144 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 MORN2Q502X0 79 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 SYT6Q5T7P8 510 aaPredicted RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 DDI2Q5TDH0 399 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 LIN54Q6MZP7 749 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 LYPD6Q86Y78 171 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 GAPTQ8N292 157 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 TCTEX1D1Q8N7M0 179 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 NPBQ8NG41 125 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 OR10V1Q8NGI7 309 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 RGP1Q92546 391 aaPredicted RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 TMEM106AQ96A25 262 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 RBMXL1Q96E39 390 aaKnown RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 OR4C12Q96R67 309 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 ANKRD60Q9BZ19 345 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 CST11Q9H112 138 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 ALX4Q9H161 411 aaPredicted RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 PARP11Q9NR21 331 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 TPSG1Q9NRR2 321 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 RCC2Q9P258 522 aaKnown RBP7.45□□□□□ -1.22
CCM2-210ENST00000478169 ORC6Q9Y5N6 252 aa7.45□□□□□ -1.22
CCM2-210ENST00000478169 SAC3D1A6NKF1 404 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 NDUFA3O95167 84 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 ALPLP05186 524 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 IGHV4-30-4P0DP06 118 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 GABRB1P18505 474 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 BLVRBP30043 206 aaPredicted RBP7.44□□□□□ -1.22
CCM2-210ENST00000478169 RASSF2P50749 326 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 CRIP2P52943 208 aaPredicted RBP7.44□□□□□ -1.22
CCM2-210ENST00000478169 PITPNAQ00169 270 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 RAB40BQ12829 278 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 SRSF7Q16629 238 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCM2-210ENST00000478169 SLC22A6Q4U2R8 563 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 C19orf54Q5BKX5 351 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 C1orf146Q5VVC0 180 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 ZNF660Q6AZW8 331 aaPredicted RBP7.44□□□□□ -1.22
CCM2-210ENST00000478169 PYHIN1Q6K0P9 492 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 RPL22L1Q6P5R6 122 aaKnown RBP7.44□□□□□ -1.22
CCM2-210ENST00000478169 ZNF554Q86TJ5 538 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 Q8N1Y9 231 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 PRR18Q8N4B5 295 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 OR4K15Q8NH41 348 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 OR1L1Q8NH94 360 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 ARPC1AQ92747 370 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 FLYWCH2Q96CP2 140 aaKnown RBP7.44□□□□□ -1.22
CCM2-210ENST00000478169 MRPS24Q96EL2 167 aaKnown RBP7.44□□□□□ -1.22
CCM2-210ENST00000478169 RITA1Q96K30 269 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 Q96MT0 163 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 ABHD14AQ9BUJ0 271 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 OR2S2Q9NQN1 319 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 ETAA1Q9NY74 926 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 KIAA1456Q9P272 454 aa7.44□□□□□ -1.22
CCM2-210ENST00000478169 IGHV4OR15-8A0A075B7B6 117 aa7.43□□□□□ -1.22
CCM2-210ENST00000478169 A0A087WW49 117 aa7.43□□□□□ -1.22
CCM2-210ENST00000478169 A0A1W2PN81 502 aa7.43□□□□□ -1.22
CCM2-210ENST00000478169 A0A1W2PP11 408 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms