RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 USP24Q9UPU5 2620 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 FRYLO94915 3013 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZFP92A6NM28 416 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 KBTBD11O94819 623 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 PFN1P07737 140 aaKnown RBP11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 EDN3P14138 238 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 CARD18P57730 90 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 B3GALT5-AS1P59052 145 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 CEACAM16Q2WEN9 425 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 ACOT6Q3I5F7 207 aaPredicted RBP11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 NCR3LG1Q68D85 454 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF324BQ6AW86 544 aaPredicted RBP11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 P4HA3Q7Z4N8 544 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR5A2Q8NGI9 324 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR1P1Q8NH06 330 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR5B12Q96R08 314 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 REPIN1Q9BWE0 567 aaKnown RBP11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 LINC00470Q9BZP3 86 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 LIN7CQ9NUP9 197 aaKnown RBP11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR14J1Q9UGF5 321 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 OTOGLQ3ZCN5 2332 aa11.56□□□□□ -0.56
HLA-DMA-208ENST00000477541 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CD300LBA8K4G0 201 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 RD3LP0DJH9 198 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 COX6A1P12074 109 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 BCL3P20749 454 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 MLF1P58340 268 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CCL7P80098 99 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 HNF4GQ14541 408 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 TCEAL6Q6IPX3 200 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 PCSK4Q6UW60 755 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF295-AS1Q8N0V1 137 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR4X1Q8NH49 305 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 MRPL30Q8TCC3 161 aaKnown RBP11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 NAT6Q93015 286 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF665Q9H7R5 613 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 GON4LQ3T8J9 2241 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGKV1-6A0A0C4DH72 117 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 RNF212BA8MTL3 300 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 SOX15O60248 233 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CYTIPO60759 359 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 VENTXO95231 258 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 TYMSP04818 313 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 METTL15P1P0C7V9 234 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 PGA5P0DJD9 388 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CCKARP32238 428 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 SRP14P37108 136 aaKnown RBP11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 MEF2BQ02080 365 aaPredicted RBP11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 PRDX4Q13162 271 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CDPF1Q6NVV7 123 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 GGNQ86UU5 652 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 CCDC74BQ96LY2 380 aa11.55□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR5B21A6NL26 309 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 PPP5D1E7EU14 171 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGHEP01854 428 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 PSMB3P49720 205 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 BSXQ3C1V8 233 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 LILRB2Q8N423 598 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR10V1Q8NGI7 309 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 NEK7Q8TDX7 302 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 TMEM170AQ8WVE7 144 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 APOBEC3DQ96AK3 386 aaPredicted RBP11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 ADGRG7Q96K78 797 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 SNX22Q96L94 193 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 ALKBH3Q96Q83 286 aaPredicted RBP11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 HIST1H2AAQ96QV6 131 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 SMIM7Q9BQ49 75 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 NDUFAF3Q9BU61 184 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 PRSS50Q9UI38 385 aa11.54□□□□□ -0.56
HLA-DMA-208ENST00000477541 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 A8MWP6 167 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 H7BYZ3 331 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 SS18L1O75177 396 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF737O75373 536 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 HRASP01112 189 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 TMEM267Q0VDI3 215 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 RSPO4Q2I0M5 234 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR56B2PQ8NGI1 322 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 PSMF1Q92530 271 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 TAF15Q92804 592 aaKnown RBP eCLIP11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 SSX3Q99909 188 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 PKIBQ9C010 78 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 SLC39A9Q9NUM3 307 aa11.53□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGKV3D-15A0A087WSY6 115 aa11.52□□□□□ -0.56
HLA-DMA-208ENST00000477541 A0A0G2JRQ6 117 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms